Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1504 ATGAAGTTGACCGGAGACAGTGCGGCGGCCGAGGATGGCGCCGCCGACTGCGCTGGTGGTCGGACGGTTGTGGTTGGGGTGAAGTTGGATCCTCGGAGCCGGGAATTGCTCACGTGGGCTCTCGTCAAAGTGGCCGAGCCTGGTGACCATGTCATTGCGCTTCATGTCCTCGACGCGATTACTGAGGGTACAGGATCGCTTCTCTCTCTTGTAAAGACTTTTGATTCCGTTCTCTCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTCAAGCTTAAAGTATGCAGAGGTGCGTCGGCCCGGAAACTTCTAGTACAGGAGGCGAAATCATTTGGTGCAGCGACTGTAATTGTGGGAACTTCTAAAACCCATCACACAATCCGGTCATCGGCATCCGTCGCTAAGTACTGTGCAAGAAAATTGCCCAAGTGTATGTCTGTCTTCGCGGTTGACAATGGCAAAATTGCATTTCACAGAGAAGCTACTAAAACATGTGCTGATCAAGTAAAATTAAATGGAGGCCCAACTTTGTCAAAAAAATCCTTCATGGTTTATACTAAGAAAAATATGAAGAATTGTGAAAGCTGTGCACGGGTGTTAGCTCTGCCAGAGGCAGAGAGTGCTGCTATTAAGGCTTTGCCTGATGAGCACGAAATGGAAGATTCTCTAGCTTTGGTACCAGTCACAAAACTTGGTGATGGCCATGGATGCGCAACTGTGGTTCAGAAATCAAACCAGTCTAAACCTGGTCGGTCACTCCTTCGCCAGGTATTCCTGCCTAAAAAGCACATGCGGAAGTCGTATATGAGCAATGCATATGTTTTTCAACGGGCAGTTGGACACACCAACTGGCAATCGTCAGCTGTAGTCCATCCAGATCATAAACAGGTTAATATTGTCATGAATGACAATACTACCCTTGATGGGGAGAGCGGTGCCATTGTGCCATTTGGATCTGCTGCTAACTTTGGCTTGAGTGACCTTCCTGAAGAATTGTTTAACTTAAAACAGAAGTACTCATCTTCCTGCAGAGTGTATAGTTTCCAGGAACTTGCTTCGGCAACAGCTAACTTTTCTTCTGAAAACTTGGTTGGTCAAGGTGGTAGTAGTTATGTTTATAGAGGATGTCTTCCAGATGGCGAGGAGTTGGCGGTGAAAATTTTGAAGCCATCAGAAGATGTGTTCAAAGAGTTTCTTTTGGAAATTGAGATCATTACAACTTTGCATCATAAGAACATAATATCTCTATCTGGGTTTTGTTTCGAGGGCAACAAGTTATTACTGGTTTATGATTTTTTATCAAGAGGAAGCCTAGAAGAGAACATTCATGGTAATAAGAAGGATTGTAATGCATTTGGTTGGCAAGAGAGGTATAAGGTGGCTGTGGGTATTGCTGAGGCACTGGACTTTCTGCATAATGGCTGTGCTGAGGCTGTGATCCATAGGGATGTAAAATCTTCGAACATCCTTCTTTCAGATGATTTTGAGCCTCAGCTCGCGGATTTTGGACTAGCCAATTGGGGTTCTTCTTCATCCCATGTTACTTGTTCTGATGTTGCTGGAACCTTTGGATACCTGGCTCCAGAATACTTTATGCATGGGAGGGTAACTGAAAAAATTGATGTATATGCTTTTGGTGTTGTGCTCCTTGAGCTTCTTTCTAGTAGGAAGCCCATCAACAATGGAAGTCCGAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACGATTTCTGAAGGATGGGAAGCTTTCCCAGTTGCTTGATTCTAGCATAGGCGGTGATAACAAACATTGGCTAATTGAAAGAATGGTTTTGGCAGCAACCCTTTGCATTAGACGAGCACCTAAATTTCGACCTCAAATCAGTATCATATTGAAACTTCTGCGTGGTGACGAAGAAGTGACAAGATGGGCAAAACAAGAAGTTAGTGCACCCGAAGAACATGATGGCTTTGATGAGGAACTGAACAATATTCAGTCCCATCTGAATCTTGCGTTGCTGGACTTGGAGGATGATGCAGTTTCTATCTGTAGCACTGAGCAGAGTGTCTCATTGGAGGACTATTTGCAAGGAAGATGGAGTCGCTCCTCGAGTTTTGACTAA 2109 0.4486 MKLTGDSAAAEDGAADCAGGRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVLDAITEGTGSLLSLVKTFDSVLSVYEGFCNLKQVDLKLKVCRGASARKLLVQEAKSFGAATVIVGTSKTHHTIRSSASVAKYCARKLPKCMSVFAVDNGKIAFHREATKTCADQVKLNGGPTLSKKSFMVYTKKNMKNCESCARVLALPEAESAAIKALPDEHEMEDSLALVPVTKLGDGHGCATVVQKSNQSKPGRSLLRQVFLPKKHMRKSYMSNAYVFQRAVGHTNWQSSAVVHPDHKQVNIVMNDNTTLDGESGAIVPFGSAANFGLSDLPEELFNLKQKYSSSCRVYSFQELASATANFSSENLVGQGGSSYVYRGCLPDGEELAVKILKPSEDVFKEFLLEIEIITTLHHKNIISLSGFCFEGNKLLLVYDFLSRGSLEENIHGNKKDCNAFGWQERYKVAVGIAEALDFLHNGCAEAVIHRDVKSSNILLSDDFEPQLADFGLANWGSSSSHVTCSDVAGTFGYLAPEYFMHGRVTEKIDVYAFGVVLLELLSSRKPINNGSPKGQESLVMWATRFLKDGKLSQLLDSSIGGDNKHWLIERMVLAATLCIRRAPKFRPQISIILKLLRGDEEVTRWAKQEVSAPEEHDGFDEELNNIQSHLNLALLDLEDDAVSICSTEQSVSLEDYLQGRWSRSSSFD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1504 702 Gene3D Phosphorylase Kinase; domain 1 330 434 - -
Bisa08g1504 702 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1504 702 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Bisa08g1504 702 Gene3D HUPs 20 153 IPR014729 -
Bisa08g1504 702 PANTHER OS08G0249100 PROTEIN 73 653 IPR046958 -
Bisa08g1504 702 Pfam Universal stress protein family 21 145 IPR006016 -
Bisa08g1504 702 Pfam Protein kinase domain 362 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1504 702 SUPERFAMILY Protein kinase-like (PK-like) 341 630 IPR011009 -
Bisa08g1504 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Bisa08g1504 702 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
Bisa08g1504 702 Gene3D Transferase(Phosphotransferase) domain 1 435 647 - -
Bisa08g1504 702 CDD USP_Like 22 147 - -
Bisa08g1504 702 FunFam Putative receptor-like serine/threonine-protein kinase 435 646 - -
Bisa08g1504 702 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
Bisa08g1504 702 SMART serkin_6 360 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1504 702 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 329 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1504 Bisa-ChrBisa08 32740522 32743756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1504 347 631 Trihelix Transcription Factor Family AT1G68690 42.088 7.74e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa08g1504 Pkinase 8.7e-41 CL0016