Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1483 ATGGACTCCTCCTCTTCTTCTCACAACAACTTCCTCGCTTTCTCTCTTTCCAACCACTCTTCTCTTTCCCTTTTCCAATCCTTCTCCTCTTCTCAACCAGGCACCACCGTTGAGGCATCGCCGGAGGCAACCGTGTTCGCCGGAGAGCCCAAGTTCGAGGACTTTCTGGGCGGCTCCACGGCCGCCACGTCAGCAGCAGTTGCACCTCCACAATTCTTTCTCGCCAATTTTTACGATTCTGAACTCAAGTACGTACCGGCTAGCTTCCTGCGCGGCTTCGCCGAACAAGCCGAGCCGCCACAACAGGCGCCGGCTCCAGCCGAGCCGTCCTCCAAGAAGACCGCGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGAGTCACCCGGCATAGATGGACGGGGAGATACGAAGCTCATCTGTGGGATAACAGCTGCAGGAGAGAGGGGCAAAGTAGGAAAGGAAGGCAAGGTGGCTATGATATGGAAGAGAAGGCAGCGAGAGCTTATGATCTCGCAGCTCTCAAGTATTGGGGTCCAGCCACCACGACCAACTTTCCTATTTCGAACTATGAGAAAGAACTGGAAGCGATGAAGAACATGACAAGGCAGGAATTTGTTGCTTCACTACGAAGGAAGAGTAGTGGTTTCTCTAGAGGGGCCTCCATATACAGAGGAGTGACGAGGCACCACCAGCATGGGCGGTGGCAAGCAAGAATAGGCAGAGTTGCCGGAAATAAAGACCTTTACCTTGGCACTTTTTGTACCCAAGAAGAAGCTGCGGAGGCCTATGATATTGCAGCCATAAAATTCAGAGGACTGAATGCAGTGACCAACTTCGACATGAGCCGATACGACGTGAAGAGCATAGCCAACGGCAACCTTCCCATAGGGGGATTCGCAGCCAAAACCAAGGACTCATCATTGGACTCTTCTCTTTCGGAATTAGCTGACCCAGACAACCTATCTTCCCAATCCTCAGTAGTAACCTTTGCATCTTCGCAACCTTCAACCTCAAATTTCAGCTTTGCCGTACCCATCATCAAACAAGACCCTTGTTCAGATTACTGGTCCAAAATTCTCAAGAACACTTGCAGTGTTACCACAAATAATCTTCCCTATAATGGCAGCACCACGCCTTTCAACTTGGACTTGCATAGCAATAATAATAACAATAACGCGTTTGTAGATGGAGGCTTTTTTTATCAGAATATTCAGCATCAAAGTGGAAGCAATAGTTGTAGTGTTGGTTCTGGTTCAGGTTCTGGTTCAAGTTCAAGTTCGATCCCATTGGCCACGCCCATTGCTTTAAATAGTAAGAGCAGTTATGAGGGCTCTTCTGGAAATGGAAACTGGAGTGTTGGACCTACTCTGCACACATTCCAAACACATGCAAAAACCAGTCTCTTTCAAACGCCGCTCTTTGGGATGGAATGA 1437 0.4948 MDSSSSSHNNFLAFSLSNHSSLSLFQSFSSSQPGTTVEASPEATVFAGEPKFEDFLGGSTAATSAAVAPPQFFLANFYDSELKYVPASFLRGFAEQAEPPQQAPAPAEPSSKKTADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDMEEKAARAYDLAALKYWGPATTTNFPISNYEKELEAMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFCTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANGNLPIGGFAAKTKDSSLDSSLSELADPDNLSSQSSVVTFASSQPSTSNFSFAVPIIKQDPCSDYWSKILKNTCSVTTNNLPYNGSTTPFNLDLHSNNNNNNAFVDGGFFYQNIQHQSGSNSCSVGSGSGSGSSSSSIPLATPIALNSKSSYEGSSGNGNWSVGPTLHTFQTHAKTSLFQTPLFGME 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1483 478 Gene3D AP2/ERF domain 124 189 IPR036955 GO:0003700|GO:0006355
Bisa08g1483 478 Gene3D AP2/ERF domain 223 283 IPR036955 GO:0003700|GO:0006355
Bisa08g1483 478 MobiDBLite consensus disorder prediction 96 119 - -
Bisa08g1483 478 CDD AP2 123 189 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 51 380 - -
Bisa08g1483 478 CDD AP2 222 283 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 FunFam AP2-like ethylene-responsive transcription factor 222 283 - -
Bisa08g1483 478 FunFam AP2-like ethylene-responsive transcription factor ANT 123 189 - -
Bisa08g1483 478 SUPERFAMILY DNA-binding domain 123 189 IPR016177 GO:0003677
Bisa08g1483 478 SUPERFAMILY DNA-binding domain 222 283 IPR016177 GO:0003677
Bisa08g1483 478 PRINTS Ethylene responsive element binding protein signature 263 283 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 ProSiteProfiles AP2/ERF domain profile. 223 281 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 ProSiteProfiles AP2/ERF domain profile. 124 187 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 Pfam AP2 domain 124 179 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 Pfam AP2 domain 223 273 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 SMART rav1_2 223 287 IPR001471 GO:0003700|GO:0006355
Bisa08g1483 478 SMART rav1_2 124 193 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1483 Bisa-ChrBisa08 31997953 32002000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1483 75 478 AP2-EREBP Transcription Factor Family AT5G57390 54.462 3.80e-140 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa08g1483 AP2 3e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1483 08 31997953 32002000 Bisa08g1483 08 31997953 32002000 ECH