Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1480 ATGGCTATGGATTCGTCTCTAGAGGTTGTCGCACTTGATCCATCCAAATACAGTAAGTTGAGTATGGAGGAAAAAAGAGAACTTGTGTATGAAATATCTAAGTGGTCACATGGTGCATCGGAAATGCTACAGTCATGGAGCCGTCAAGAGATTTTACAAATCCTCTGCGCTGAGATGGGAAAAGAAAGAAAGTATACTGGGTTAACTAAGTTGAAAATTATTGAAAACCTTCTAAAACTTGTTTCTGAAAAGAAATCAGGAAGCCATGAAATTGCGACAGACCTTGAACCACATTCTTCTACTGCACATGGCCAGAAACCTACTAAAAGACAGAGAAAAAATGAGAATCCATCTCGATTACCCCTTCCAGCAAATGATGTTTCTGCCAACAATGGAGTTGGAGATGTAAGTAGTATTTCATACTGCAAAAACACAGCTTGCAAAGCTACCCTAAGTGAAGCAGATCCGTTTTGCAAAAGATGCTCATGCTGCATTTGTCATAAATATGATGACAATAAAGATCCTAGCCTTTGGTTAATATGTAGCTCTGATCCTCCATTTCTTGGTGTTTCTTGTGGCTTGTCATGTCATCTTGAGTGTGCTTTAAAGCATGATAGTACCGGCATTGCCAAAGATGGAAAATGTCCCAAGCTTGATGGAGGCTTCTACTGCATTTCTTGTGGGAAAATGAATGATTTTCTCGGATGCTGGAGAAAGCAGCTGATGGTGGCAAAAGATACTAGACGTGTGGACATACTATGCTATCGTGTTTCCTTAAGCCAAAGAATTTTACAAGGGACTGACAAGTATCAACAACTTTATGAAATCGTTGATGAGGCAGTGAGGAAACTTGAACTTGAAGTGGGTCCACTGATTGGCTCGCCAGTGAAGATTGGTAGGGGTATTGTGAACAGACTTTCATCAGGACCAGAGGTTCAGAAACTCTGTGGTTTGGCTTTGGAATCACTGGATTCTTTTCTTTCTAAAAGGGTCATGCCTTCATCACATATTCCAACAATTCAAGATGCAAATTTGATTGCTCCAAGTATGGTGAAGTTTGAAGATGTCACTGATACATCCCTGACGGTGATTTTGGGTTCTGAAGATCCGTCTGGGCAAAACATTATCGGTTATGCCTTGTGGCATCGGAAGGCTCATGATGTGGACTACCCTGTTGAGCCAACTTGTACTTTACATCTACCAAATAGAAGTTTCAGTGTAAGGGGTCTAGTTCCAGCTACAGAATATTGTTTCAAAGTTGTTCCCTTTAATGATTCAAGGGAGTTTGGGATGTGTGAAGTTCACATCTCAACAGAGCATGGCGAGGATGAAGTCCCAAACTGCTCAGCGACAGAAAGAAGTCAGAGCCCAGTAACCAATTGTAGCAGCCATTCCAATCCTTCTTCTGTGGAAGATGAAACTAATAACAGTAATCCATATAGTGACCAGACTGACAATCGAGTGGACAATTATCTTGCTTATCACAAGGACACCGACAAGATTGCTTCTGAAAATTTATCTAATGATGCCATTAAATGTTCCAACACAGGTGGAGGGGGACTCCCAGCAGATGCAGATTCATTGTCAGACAAGCAACGTGGTATAGGATTGGCTGTAACCATACCTGGTTCCGAGGTGCTAAAGCCTGAAAACAACCACTCACAAGAGGAACAAATCACTGAAGATTTGAGCACTGATGATGGGTTGAATTCCCCTGTTCAGACTAGGAGGGAAAGTGTCCCATCTGTGCGTAGCTCAGAAGCAGGCTTGCCTATTACTCCCTGCAAGTTGGAAATACTTAAGGATGCACAAGGAAGAAATGGGAGATCTAAGTCTGTTGGCAAGGATCAGGATAATGGGTCTGGGAAAAGAGAGGGCCCTCATGATGGAAGCACATCTAAGAAGACAAGTGGAGAAAGGCAAGATGAGGGTTGTGCAGCCAATGGCTTTCCTGATCGAGATTTTGAGTATTATGTGAAGGTGATCAGATGGCTAGAGTGTGAAGGACATATAGAAAAAAACTTCAGACAGAAATTTTTGACTTGGTACAGCTTGAGAGCAACATCACAGGAAATAAAGGTTGTAAAAGTATATATTGATACATTTCTTGAAGATCCAGCATCTCTTGCAGAGCAGCTTGTGGACACCTTCTCAGAATGTATATCAAACAAGAGACCATCTGTGGTGCCAGCTGGGTTCTGCATGAAGCTTTGGCATTGA 2220 0.4198 MAMDSSLEVVALDPSKYSKLSMEEKRELVYEISKWSHGASEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKLVSEKKSGSHEIATDLEPHSSTAHGQKPTKRQRKNENPSRLPLPANDVSANNGVGDVSSISYCKNTACKATLSEADPFCKRCSCCICHKYDDNKDPSLWLICSSDPPFLGVSCGLSCHLECALKHDSTGIAKDGKCPKLDGGFYCISCGKMNDFLGCWRKQLMVAKDTRRVDILCYRVSLSQRILQGTDKYQQLYEIVDEAVRKLELEVGPLIGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSFLSKRVMPSSHIPTIQDANLIAPSMVKFEDVTDTSLTVILGSEDPSGQNIIGYALWHRKAHDVDYPVEPTCTLHLPNRSFSVRGLVPATEYCFKVVPFNDSREFGMCEVHISTEHGEDEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPYSDQTDNRVDNYLAYHKDTDKIASENLSNDAIKCSNTGGGGLPADADSLSDKQRGIGLAVTIPGSEVLKPENNHSQEEQITEDLSTDDGLNSPVQTRRESVPSVRSSEAGLPITPCKLEILKDAQGRNGRSKSVGKDQDNGSGKREGPHDGSTSKKTSGERQDEGCAANGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATSQEIKVVKVYIDTFLEDPASLAEQLVDTFSECISNKRPSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1480 739 ProSiteProfiles Fibronectin type-III domain profile. 347 443 IPR003961 GO:0005515
Bisa08g1480 739 MobiDBLite consensus disorder prediction 89 129 - -
Bisa08g1480 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Bisa08g1480 739 MobiDBLite consensus disorder prediction 440 486 - -
Bisa08g1480 739 CDD FN3 347 425 IPR003961 GO:0005515
Bisa08g1480 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 739 IPR044514 GO:0010048|GO:0040029
Bisa08g1480 739 MobiDBLite consensus disorder prediction 542 588 - -
Bisa08g1480 739 CDD PHD_VIN3_plant 162 227 - -
Bisa08g1480 739 MobiDBLite consensus disorder prediction 603 647 - -
Bisa08g1480 739 MobiDBLite consensus disorder prediction 448 486 - -
Bisa08g1480 739 SUPERFAMILY Fibronectin type III 347 426 IPR036116 GO:0005515
Bisa08g1480 739 Gene3D Immunoglobulins 328 430 IPR013783 -
Bisa08g1480 739 SMART FN3_2 345 430 IPR003961 GO:0005515
Bisa08g1480 739 MobiDBLite consensus disorder prediction 564 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1480 Bisa-ChrBisa08 31915830 31920812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1480 3 606 PHD Gene Family AT4G30200 47.410 2.61e-172 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1480 08 31915830 31920812 Bisa08g1480 08 31915830 31920812 ECH