Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1475 ATGAGGTATATTGGAACCAAGAGCTTCAAGCGCCTCTTCTCCTTCAAACGACGCAGTTTCGACGAAGAAGTAATTTTGAGGCCACACGAGATAGAAGCTCCTAAAAGGCCCACTTGGAAGTGCTTCTCTTATCAAGAATTATCCGACGCCACTAATAGGTTCAGCTCAGGAAATCTGGTTGGAAAAGGAGGCTTCTCAGAGGTTTACAAGGGAAAATTAGAAGATGGTGAAGAAATTGCCGTGAAAAGGCTCGCAAAGGCTTGCAGTGATGAGAGGAAAGAGAAGGAGTTCTTGACAGAGATTGGAACAATAGGACACGTGCGTCATCCAAACGTCTTGCCTCTTCTGGGTTGCTGTATTGACAATGGCCTTTACCTCGTCTTTCACCTATCATCTAGAGGCTCTCTAGCTTCTCTCCTTCACGATGAGAATGTGGGTCCGATGGATTGGAAAACGAGGCATAAGATAGCCGTGGGGACTGCACGTGGGCTTCACTACTTGCACAAGGGATGCCAGAGGAGGATAATCCACAGGGACATCAAAGCCTCTAACATTCTATTGACTGCAGATTTTGAGCCACAGATATCTGATTTTGGATTGGCGAAATGGCTTCCGTCTCAGTGGACTCATCATTCAATTGCCCCCATAGAAGGCACTTTTGGGCACTTGGCTCCAGAGTACTACATGCATGGAATCGTGGATGAGAAGACAGATGTATTTGCATTTGGGGTGTTGTTGCTGGAAGTAATATCTGGGAGGAAACCTGTGTATGGGTCTCACCAAAGCTTACACACCTGGGCGAAACCAATATTGAAAAAGGGCGAGATGGAGAAGCTGGTGGATCCGAGGCTGGAAGGGGCCTATGATGTGACAGAGTTAACAAAACTTGCATTTGCTGCCTCTCTCTGCATTCGATCGTCTTCCACTTGGCGACCTACCATGACCCAGGTATTAGAGGTAATGGAGGAGGGTGAGATAGATGAAGAAAAGTGGAAAATGGCAGAGGAAGAAGAAGAGGAAGAAGAGTTTTGGGATTTTGACGATCTCGATTATAACAGTTCCTTCTCCATATCTCTCCCTGATTCCACTGGAAGTACTTAG 1101 0.4641 MRYIGTKSFKRLFSFKRRSFDEEVILRPHEIEAPKRPTWKCFSYQELSDATNRFSSGNLVGKGGFSEVYKGKLEDGEEIAVKRLAKACSDERKEKEFLTEIGTIGHVRHPNVLPLLGCCIDNGLYLVFHLSSRGSLASLLHDENVGPMDWKTRHKIAVGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVLLLEVISGRKPVYGSHQSLHTWAKPILKKGEMEKLVDPRLEGAYDVTELTKLAFAASLCIRSSSTWRPTMTQVLEVMEEGEIDEEKWKMAEEEEEEEEFWDFDDLDYNSSFSISLPDSTGST 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1475 366 ProSitePatterns Protein kinases ATP-binding region signature. 60 82 IPR017441 GO:0005524
Bisa08g1475 366 CDD STKc_IRAK 60 323 - -
Bisa08g1475 366 SUPERFAMILY Protein kinase-like (PK-like) 35 321 IPR011009 -
Bisa08g1475 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Bisa08g1475 366 SMART serkin_6 54 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1475 366 FunFam Putative receptor-like serine/threonine-protein kinase 132 345 - -
Bisa08g1475 366 Gene3D Phosphorylase Kinase; domain 1 27 129 - -
Bisa08g1475 366 Gene3D Transferase(Phosphotransferase) domain 1 132 350 - -
Bisa08g1475 366 FunFam Putative receptor-like serine/threonine-protein kinase 22 130 - -
Bisa08g1475 366 Pfam Protein tyrosine and serine/threonine kinase 57 318 IPR001245 GO:0004672|GO:0006468
Bisa08g1475 366 ProSiteProfiles Protein kinase domain profile. 54 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1475 366 PANTHER OS08G0249100 PROTEIN 33 350 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1475 Bisa-ChrBisa08 31776899 31781490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1475 40 342 Receptor kinase-like Gene Family AT1G60800 43.730 5.98e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa08g1475 PK_Tyr_Ser-Thr 3.7e-42 CL0016