Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1470 ATGGAGTGGGACAGCAATTCGGATCTAAGCGGGGACGAGGAGGAAACCTTCGCGTTCAACGATGCCAGTCCACTTCCCTTCCCGGTCGAGAACTTGCTTCAAACGGCTCCCTGTGGGTTCGTCGTTACTGATGCGCTCGAGCCTGACCACCCAATTATTTATGTAAATACCGTGTTCGAGATGGTCACTGGGTATCGGGCAGAGGAGGTGCTTGGTCGCAACTGCCGTTTCTTGCAGTGTCGGGGTCCGTTTGCTAAAAGAAGGCATCCATTGGTGGACTCCACTGTAGTTTCAGAAATTAGGAAATGCCTTGAAGAGGGGGTTGAATTCCAAGGTGAGTTGTTGAACTTTAGGAAAGATGGATCTCCACTGATGAACAGATTGCGGCTGACACCAATATATGGAGATGATGAGACTATAACACATGTCATTGGAATCCAGTTCTTCACGGAGGCAAACATTGATCTTGGTCCTGTTCTGGGCCCTACGGTTAAGGAATCTGCTAAATCATCTGATCGGTTTTCCCTGCTTTCATCATTGAGTCCTCTTCTGGTTGGGGACCGGAATGTATCTCGTGGAGTTTGTGGGATACTGCAATTGAGTGATGAGGTACTGTCTCTCAAGATACTTGCCCGCCTAACTCCAAGGGATATTGCATCTGTTGGCTCTGTCTGCAGGCGATTGTATGAGATAACAAAAAATGAAGACCTTTGGAGAATGGTGTGCCAAAATGCATGGGGCAGTGAAACTACACGTGTTTTAGAGACAGTTCCTGGTGCAAGGAGACTTGGATGGGGTCGATTGGCAAGGGAATTGACCACTCTTGAAGCGGCAGCATGGAGGAAGCTGACAGTTGGAGGTGCTGTTGAACCCTCACGTTGTAATTTTAGTGCTTGTGCAGTTGGTAATAGAGTTGTCCTATTTGGTGGTGAAGGGGTTAACATGCAACCTATGAATGACACTTTTGTGCTAGATCTCAACTCGAAAAATCCTGAGTGGCAACACATCCAGGTGAGCTCTCCTCCTCCTGGTCGTTGGGGCCACACAATTTCTTGTGTTAATGGTTCTAATTTGGTTGTATTTGGAGGCTGTGGAAGACAGGGCTTGCTCAATGATGTGTTTGTGCTGGACCTGGATGCAAAGCCTCCAACTTGGCGTGAAATATCTGGATTGGCACCTCCACTTCCAAGATCATGGCACAGCTCCTGTACTCTTGATGGTACTAAGTTGATAGTTTCTGGTGGCTGTGCAGATTCTGGAGTACTTTTGAGTGATACATTCCTCCTTGATTTGTCAATGGAGAAGCCTGTCTGGAGAGAGATACCAGTGGCATGGACCCCACCTTCTCGTCTTGGGCACACACTGACTGTTTATGGTGGTAGGAAAATACTGATGTTTGGGGGTCTGGCAAAAAGTGGGCCCTTGCGGTTTCGTTCCAGTGATGTATTCACCATGGATTTAAGTGAGGAGGAACCATGTTGGAGATGTGTAACCGGGAGTGGAATGCCTGGTGCTGGGAATCCTGGGGGCATAGCTCCTCCTCCTAGACTTGATCATGTTGCTGTTAGTCTTCCAGGTGGGAGAATCCTGATATTTGGTGGATCTGTTGCAGGTCTTCACTCAGCCTCCCAGCTTTACATCCTGGACCCAACTGATGAGAAGCCTACATGGAGAATTCTGAATGTACCTGGTCGCCCTCCGAGATTTGCTTGGGGACACAGTACATGTGTTGTTGGAGGGACAAGAGCTATTGTTCTGGGTGGTCAAACTGGAGAGGAATGGATGCTAAGTGAGCTCCATGAGCTTTCTCTGGCAAGTACTGTCATCTAG 1830 0.4831 MEWDSNSDLSGDEEETFAFNDASPLPFPVENLLQTAPCGFVVTDALEPDHPIIYVNTVFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRKCLEEGVEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANIDLGPVLGPTVKESAKSSDRFSLLSSLSPLLVGDRNVSRGVCGILQLSDEVLSLKILARLTPRDIASVGSVCRRLYEITKNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSKNPEWQHIQVSSPPPGRWGHTISCVNGSNLVVFGGCGRQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVAWTPPSRLGHTLTVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGIAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASTVI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1470 609 FunFam Putative LOV domain-containing protein 475 608 - -
Bisa08g1470 609 Pfam Galactose oxidase, central domain 357 404 - -
Bisa08g1470 609 Pfam F-box-like 205 243 IPR001810 GO:0005515
Bisa08g1470 609 CDD PAS 36 146 IPR000014 -
Bisa08g1470 609 CDD F-box_AtADO-like 196 242 - -
Bisa08g1470 609 Gene3D PAS domain 22 158 - -
Bisa08g1470 609 Gene3D - 193 241 - -
Bisa08g1470 609 Pfam Kelch motif 450 501 IPR011498 GO:0005515
Bisa08g1470 609 Pfam Kelch motif 517 564 IPR011498 GO:0005515
Bisa08g1470 609 SUPERFAMILY F-box domain 189 258 IPR036047 GO:0005515
Bisa08g1470 609 SUPERFAMILY Galactose oxidase, central domain 280 594 IPR011043 -
Bisa08g1470 609 Pfam Galactose oxidase, central domain 293 343 - -
Bisa08g1470 609 SUPERFAMILY PYP-like sensor domain (PAS domain) 36 147 IPR035965 -
Bisa08g1470 609 FunFam Putative LOV domain-containing protein 270 474 - -
Bisa08g1470 609 FunFam Adagio protein 1 27 158 - -
Bisa08g1470 609 NCBIfam PAS domain S-box protein 32 146 IPR000014 -
Bisa08g1470 609 Pfam PAS domain 37 147 IPR000014 -
Bisa08g1470 609 Gene3D - 496 608 IPR015915 GO:0005515
Bisa08g1470 609 Gene3D - 271 495 IPR015915 GO:0005515
Bisa08g1470 609 ProSiteProfiles PAS repeat profile. 29 107 IPR000014 -
Bisa08g1470 609 FunFam Adagio protein 1 194 241 - -
Bisa08g1470 609 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 27 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1470 Bisa-ChrBisa08 31519778 31529265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1470 33 148 AGC Kinase Gene Family AT5G58140 33.621 1.08e-14 75.9