Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1412 ATGCCTTTAGATCTTAACGAAAAAGATCAAAACAATCAAGCCTCTTCCTCTTCTTCTACTCTACTATATCCTATTCTCTTCGACCCACATCATGATCAACCACCATCTTCAACCCTCTCGCGAACTAATCATGAAGAGGCCGAGAAGATTTTAATTTCTTCTATTAGATCATGGGATTATGCAGCAGATCAAAGGGATGATATCAGCAACAGTAGTCTCAAACCGAAAGAAGATCGTAAGTATGGAATTAGGGTTTGTGCTGATTGCCACACCACTAAGACCCCCCTTTGGAGGAGTGGACCAACAGGCCCCAAGTCACTATGCAATGCCTGTGGAATTCGACAAAGAAAGGCGAGGCGAGCGGCCATGGCTGCAGCATCGGTAAACGGCGCAATCATTGCACCAAAGGCTCCTGTAGCGAAGGGAAACAATAAGTTACACAAAAAACAGAAGAAGCAGCAGATTGAGTGCACAAGACAATCGAAAAAGAAGCCAAAAAAGCTTGGAACAAAGGCATGTAGAGGTAGAAAGAATTTCGGCTTCGAGGATTTCACGATCAGCTTGAGGAACAATTTGGCTCACCAACAAGTTTTCCCTCAGGATGAGAAGGAGGCTGCAATTCTTCTTATGTCTTTATCTTATGGCCTTGTTCATGTATAA 660 0.4348 MPLDLNEKDQNNQASSSSSTLLYPILFDPHHDQPPSSTLSRTNHEEAEKILISSIRSWDYAADQRDDISNSSLKPKEDRKYGIRVCADCHTTKTPLWRSGPTGPKSLCNACGIRQRKARRAAMAAASVNGAIIAPKAPVAKGNNKLHKKQKKQQIECTRQSKKKPKKLGTKACRGRKNFGFEDFTISLRNNLAHQQVFPQDEKEAAILLMSLSYGLVHV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1412 219 CDD ZnF_GATA 85 113 IPR000679 GO:0006355|GO:0043565
Bisa08g1412 219 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 83 119 - -
Bisa08g1412 219 ProSiteProfiles GATA-type zinc finger domain profile. 80 116 IPR000679 GO:0006355|GO:0043565
Bisa08g1412 219 SMART GATA_3 80 133 IPR000679 GO:0006355|GO:0043565
Bisa08g1412 219 Gene3D - 80 124 IPR013088 GO:0006355|GO:0008270
Bisa08g1412 219 ProSitePatterns GATA-type zinc finger domain. 86 111 IPR000679 GO:0006355|GO:0043565
Bisa08g1412 219 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 40 218 - -
Bisa08g1412 219 FunFam GATA transcription factor 21 80 167 - -
Bisa08g1412 219 Pfam GATA zinc finger 86 119 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1412 Bisa-ChrBisa08 29848048 29849225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1412 63 218 C2C2-Gata Transcription Factor Family AT4G26150 39.080 4.83e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa08g1412 GATA 3.9e-17 CL0167