Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1407 ATGAAAGCTTCATTGTTTTTGGCACTCCTGAATTCAAGAGCTTGGGAAGTCGAAAGGGTGTCTATAGAAGGGGCGAAAGGCTTGTGGCACGGTGACCCCCTTTACATCTGGCGTGGCCTAAGGCTTCATGTCTCTGAAACTGAAAGTATTCTCCATGAAGCTACCCCTACTAACTCTTTCAAGAGTGCTAGAGAGCTTCGCATCTCTGGTCTTTGTATTAGATGTGGCGGCAATATGGAATCCATCCTCCATTGCTTGAGCATTTCAGTTTTACTTCCAACCCTACCTTCTTTAATCAAAACAACCATTGGTGCTTTACTGAGCATGCAATCTGGAGTAGGGATGATGGAAGCAATGAAATCCTTTTTCTATGTGTCCTCTGGTGGTGCTATAAGAGAGGAAACAATTACATTCTTGGTGATGGTAATCTCAATTTTGTGGGGACTTGCACGAAAATCTTGTGTTTTTATTCAGATGACCCTGCTCAATTCCGGAGCATTTTACTTTTTGCTTGCAGGAATAGCAGTGCTAATCGTATTGCTGATTCTTGTGTTTGTGTTTCGAAAGCGCATTAAACCAGCAATACCGACCGAAACAAAAGCTTCCACAAAAATAGAGGTGATGAAGATAATAGCTCCAACGAAGCAGCATCAAGGGTCTATGGAGTTCTTCAGTGGCAGTGTTCGAGAAATTAGCTATTTTGACTTTCAGACACTGAAGAAGGCAACGATGAATTTTCATCCTGGTAATCTCCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGGAGATGGAAGGGTGATTGCTGTGAAGACATTGTCCCTCAACAAATCACAGCAAGGAGAAAAAGAATTTGTTGCAGAAGTGAGACTGATTACAAGTATCCAACATAAGAATTTGGTGCGCCTGCTGGGTTGCTGCACCGACGGCCCTGAAAGGATACTTGTGTATGAGTACATGAAGAACAGAAGTTTAGACCTCATTATCAATGGAGAGAGCGATCAGTTTCTGAATTGGAGCACCAGGTTCCAAATCATTGTTGGAATAGCACGGGGATTGCAGTACCTACATGAGGATTCGCATATAAGAATTGTTCACAGAGATATCAAAGCAAGCAATATTCTTCTCGACGGCAGGTTTCAGCCGAGGATCGGAGACTTCGGACTAGCGAGGTTCTTCCCTGAAGACCAAGCCTACTTGAGTACTCAGTTTGCAGGCACATTGGGTTATACAGCTCCTGAATATGCTACAAGAGGAGAACTGTCAGAGAAGGCAGACATCTATAGTTTTGGAGTTCTGTTGCTTGAAATCATCAGTTGCAGGAAAAACACAAATCTCACTTTACCATCCCATATGCAGTACCTTCCTGAGTATGCGTGGAAGCTGTACGAGAATTCAAGGTTGTTGGATCTGGTAGATGCGAAACTGGGAGCAGAGGGATTTGTGGAAAAGGACGTAATGCAAGCCATTCATGTGGCCTTGTTATGCCTTCAGCCTCGTCCCAATCTGAGGCCTCCCATGTCCGAGGTTGTTGCTTTGTTGACTTTCAAAATCGAGATGGTCACTACTCCCATGAGACCTGCTTTCCTTCATCCCAGGCCTCACCCACCATGA 1623 0.4442 MKASLFLALLNSRAWEVERVSIEGAKGLWHGDPLYIWRGLRLHVSETESILHEATPTNSFKSARELRISGLCIRCGGNMESILHCLSISVLLPTLPSLIKTTIGALLSMQSGVGMMEAMKSFFYVSSGGAIREETITFLVMVISILWGLARKSCVFIQMTLLNSGAFYFLLAGIAVLIVLLILVFVFRKRIKPAIPTETKASTKIEVMKIIAPTKQHQGSMEFFSGSVREISYFDFQTLKKATMNFHPGNLLGSGGFGPVYRGKLGDGRVIAVKTLSLNKSQQGEKEFVAEVRLITSIQHKNLVRLLGCCTDGPERILVYEYMKNRSLDLIINGESDQFLNWSTRFQIIVGIARGLQYLHEDSHIRIVHRDIKASNILLDGRFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYATRGELSEKADIYSFGVLLLEIISCRKNTNLTLPSHMQYLPEYAWKLYENSRLLDLVDAKLGAEGFVEKDVMQAIHVALLCLQPRPNLRPPMSEVVALLTFKIEMVTTPMRPAFLHPRPHPP 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1407 540 ProSiteProfiles Protein kinase domain profile. 246 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1407 540 Gene3D Phosphorylase Kinase; domain 1 204 322 - -
Bisa08g1407 540 SMART serkin_6 246 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1407 540 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 323 527 - -
Bisa08g1407 540 FunFam Cysteine-rich receptor-like protein kinase 10 210 322 - -
Bisa08g1407 540 CDD STKc_IRAK 252 518 - -
Bisa08g1407 540 SUPERFAMILY Protein kinase-like (PK-like) 224 520 IPR011009 -
Bisa08g1407 540 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 172 533 - -
Bisa08g1407 540 Gene3D Transferase(Phosphotransferase) domain 1 323 525 - -
Bisa08g1407 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Bisa08g1407 540 Pfam Protein tyrosine and serine/threonine kinase 249 516 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1407 Bisa-ChrBisa08 29795889 29802935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1407 164 533 Receptor kinase-like Gene Family AT1G56120 43.396 9.32e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa08g1407 PK_Tyr_Ser-Thr 8e-47 CL0016