Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1401 ATGGCAATTGCAGCAACCTCATCGCCCACCACCATGAGCCTCAGCCATAGCCATAGCCATAGCCATAGCCTTGGCCACAGCCATACCGAGCACGAAGACACCACCAGCAACGAGAATTACAAGAAGCACAACAAGGTCGTAGATGAGGTCGACGATAACGAAGATGACATTGGAAGTGGTCACGAGCAAGACATGGTCATGCCCGGGTTCCGCTTCCATCCAACCGAAGAAGAACTCGTCGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCGTTTCAACGTTGAGCTCATCACTTTCCTCGATCTTTATCGATATGACCCTTGGGAGCTTCCTGCTTTGGCAGCAATAGGAGAGAAGGAGTGGTACTTCTATGTGCCGAGAGATAGGAAGTATCGGAACGGTGACCGTCCAAATCGTGTGACTACGTCTGGGTATTGGAAGGCCACTGGGGCTGATAGAATGATTCGAACAGATAGCTTTAGATCTATTGGTCTTAAGAAAACCCTAGTTTTCTACTCTGGCAAGGCTCCTAAAGGCATCAGAACTGGATGGATTATGAACGAATATCGCTTGCCACACCATGAAACTGAACGATATCAAAAGGCTGAGATATCACTTTGCCGAGTGTACAAGAGAGCTGGAGTAGAAGACCATCCCTCTCTCCCTCGTTGTCTCCCAACATCTTCAAGATCAGCCTCGCATAGTTCACTCAAGAATAAGCACAGCAACGTCAACGAAATGGTTCAGCACAGCATGGGATTTCTGGGACATTCCCCGCAGCATCGACCTCAAATGGATGAAATAGTTGACAAAATTAATGAAACTGAGGGAAGCACTAGCAGCACCACCAATAATGCCAGGAGCAATTACCGGTTCCCATTGGAGGATCACGAAGAAGGGTTAATGCTCATGCAGCAACCAAAGCAAGCACAAGTAGAATCAACAGTCAGCTCCTTCTTCCCCACAGGCTCTTCTTCTAATTCTCAGTCGTTGCCATCTAATACCAACCATAATAACGCAATGATGATGGATGATAATCTTAATAGGCTTTTGAGTTATAATCAGCAGTTACAGTACTACAATACAATCAATGCTCCTCCTCAAAATCACCAATATCATCACTCCAACCTGCAGTTCTCTAATCTGCTCTTGCAGCCGCAACAGCCAATGGTGGCTCTCAATTCCTTCTCTGAAAGATTGTGGGAGTGGAATCCAATCCCTGAGGCCACAAACCGAGACTTCAACAACACGCCCTTCAAGTAA 1266 0.47 MAIAATSSPTTMSLSHSHSHSHSLGHSHTEHEDTTSNENYKKHNKVVDEVDDNEDDIGSGHEQDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTDSFRSIGLKKTLVFYSGKAPKGIRTGWIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPTSSRSASHSSLKNKHSNVNEMVQHSMGFLGHSPQHRPQMDEIVDKINETEGSTSSTTNNARSNYRFPLEDHEEGLMLMQQPKQAQVESTVSSFFPTGSSSNSQSLPSNTNHNNAMMMDDNLNRLLSYNQQLQYYNTINAPPQNHQYHHSNLQFSNLLLQPQQPMVALNSFSERLWEWNPIPEATNRDFNNTPFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1401 421 MobiDBLite consensus disorder prediction 319 338 - -
Bisa08g1401 421 SUPERFAMILY NAC domain 65 212 IPR036093 GO:0003677|GO:0006355
Bisa08g1401 421 MobiDBLite consensus disorder prediction 1 20 - -
Bisa08g1401 421 Pfam No apical meristem (NAM) protein 68 192 IPR003441 GO:0003677|GO:0006355
Bisa08g1401 421 FunFam NAC domain-containing protein 35 75 216 - -
Bisa08g1401 421 Gene3D NAC domain 75 216 IPR036093 GO:0003677|GO:0006355
Bisa08g1401 421 ProSiteProfiles NAC domain profile. 66 213 IPR003441 GO:0003677|GO:0006355
Bisa08g1401 421 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 64 332 - -
Bisa08g1401 421 MobiDBLite consensus disorder prediction 23 40 - -
Bisa08g1401 421 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1401 Bisa-ChrBisa08 29701625 29703717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1401 65 237 NAC Transcription Factor Family AT2G02450 88.439 7.02e-113 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa08g1401 NAM 4.6e-34 No_clan