Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1398 ATGGGAAACTGTTTGGGTCGGCAATCAGGTTCTTCAAGCGGTCAACCCAACTCCAACACTGCCGGCAACGACAACCAATTGGGGAGCAGGCAGTTATTCGCTAGGCACAGTATTTCAAGATTATTGCAGAGTACAAGCAATTCTACGTTGTTTGGACGCAGCAGCCTCTCTGCTGGAAATAGCCGGCCATTTGGGCCAAGTAGCAGTAACACATACCCAACCAGCGATACTACTACATCTTTTATAGGCTCTGATATCAGCCAAACCTTTCGAGTAAGAGGTGAGGAGGAATTTCCTAATGGGCAGATCTTAAATGCGGCAAACTTGAGAGTTTTCACTTTTAAAGAACTAAAGGCGGCAACTAGAAATTTCAGAGCTGATACGCTTTTAGGAGAGGGAGGTTTTGGCAGAGTGTATCAAGGTTGGCTTAAAGAGAGAGCATCGTCAACTAGAGATGGGGATTTGGTCATAGCTATCAAGAGATTGAATTCTAATAGCATGCAAGGATTTGAAGAATGGAAGTCGGAGGTAAATTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTAAAGTTGTTTGGATTTGGAAGGGAAAATGGGGAGCTATTTCTGGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCAGCTATTTGGAAGAGGGTCAAATGTAAAGCCACTTTCATGGGAAACAAGGATAAAGATAATGATTGGAACAGCTAGGGGCCTAGCTTTCCTACACTCGTTAGAGAATAAAATCATATACAGAGATATAAAGCCATCTAACATCCTACTTGACAAGTTCTACACTGCCAAGTTGGCAGACTTTGGCTTGGCCAAAGATGGTCCGTCAGATGATAAAACTCATGTGACAACAAGGGTTGTGGGAACCTCCGGTTATGCTGCACCTGAGTACATGGCCACAGGGCACCTGTCTGTGAAAAGTGATGCGTATGGATTTGGAATTGTTTTGGTGGAGATGCTCACTGGCAAATCAATACATGATATAATGCATCTCTGCCAGGGAAAATCATTCATTGATTGGCTCAAATCAAATCTACTGAGTAAAGGGAAGATGAGAAACACGATGGACAAACGATTGGAGGGAAAATATCCACCCAAGTTAGCATCACAAGTAGCTCAACTCGCTCTTAAATGTGTCCAAATGGAACATAAACTCAGGCCACCAATGACGGAAGTTGTTGAAACATTAGAACAAGTAGAAGCAGCAACAAGGGACAAAACAACTGATAACAGAAAGCGTATGACTCATTCTGGGGCAGATCAACTTCATGGCCGGCCAGATGGAGGTTAA 1314 0.4338 MGNCLGRQSGSSSGQPNSNTAGNDNQLGSRQLFARHSISRLLQSTSNSTLFGRSSLSAGNSRPFGPSSSNTYPTSDTTTSFIGSDISQTFRVRGEEEFPNGQILNAANLRVFTFKELKAATRNFRADTLLGEGGFGRVYQGWLKERASSTRDGDLVIAIKRLNSNSMQGFEEWKSEVNFLGRLSHPNLVKLFGFGRENGELFLVYEFMHKGSLANQLFGRGSNVKPLSWETRIKIMIGTARGLAFLHSLENKIIYRDIKPSNILLDKFYTAKLADFGLAKDGPSDDKTHVTTRVVGTSGYAAPEYMATGHLSVKSDAYGFGIVLVEMLTGKSIHDIMHLCQGKSFIDWLKSNLLSKGKMRNTMDKRLEGKYPPKLASQVAQLALKCVQMEHKLRPPMTEVVETLEQVEAATRDKTTDNRKRMTHSGADQLHGRPDGG 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1398 437 CDD STKc_IRAK 130 406 - -
Bisa08g1398 437 Gene3D Phosphorylase Kinase; domain 1 108 207 - -
Bisa08g1398 437 MobiDBLite consensus disorder prediction 409 437 - -
Bisa08g1398 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Bisa08g1398 437 MobiDBLite consensus disorder prediction 1 26 - -
Bisa08g1398 437 SUPERFAMILY Protein kinase-like (PK-like) 109 405 IPR011009 -
Bisa08g1398 437 SMART serkin_6 124 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1398 437 MobiDBLite consensus disorder prediction 52 80 - -
Bisa08g1398 437 Gene3D Transferase(Phosphotransferase) domain 1 208 430 - -
Bisa08g1398 437 ProSiteProfiles Protein kinase domain profile. 124 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1398 437 PANTHER OS01G0588500 PROTEIN-RELATED 66 408 - -
Bisa08g1398 437 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 208 419 - -
Bisa08g1398 437 Pfam Protein kinase domain 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1398 437 ProSitePatterns Protein kinases ATP-binding region signature. 130 160 IPR017441 GO:0005524
Bisa08g1398 437 FunFam Serine/threonine-protein kinase BIK1 92 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1398 Bisa-ChrBisa08 29613692 29622251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1398 102 404 Glycoside Hydrolase AT3G07070 42.434 1.18e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa08g1398 Pkinase 5e-46 CL0016