Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1381 ATGGAGAATATTGGCGAAGAGTACAGGCATTACTGCGAGACCAACATGTTCTATCAAACCGAAGAACTCTACAGCTGGGGATTAGGCGACGAGGCCTTCTCCGGCTATTACGATTCGAGCTCGCCGGACGGCACGGCGTCGTCGGCTGCGTCGAAGAACATTGTGTCGGAGAGGAATCGGAGGAAGAAGCTGAACGATAGGCTCTTTGCTCTTAGATCCGTCGTCCCCAACATCAGCAAGATGGACAAGGCTTCGATAATTAAGGATGCTATAGAGTACATCCAACACTTGCACGAGCAAGAGAAGAGTATTGAAGCCGAGATCACAGAGCTGGAATCTGGGAAGCAGATGATGAAAAACTCGAGCAATTTTGACTTCGAAACAGACCTCCCTGTTCTGCTGAGGTCGAAGAAGAAGAAAACAGAGCAGCAACTACTGTCCGATTCCGTCATCAGCTCGAGAAATTCCCCAATTGAAGTCGTTGAGCTGAGGGTAACATACATGGGAGAGAGGACGATTGTGGTGAGCTTGACGTGTAGTAAGAGGACGGACACAATGGTGAAACTGTGCGAAGTGTTCGAGTCACTGAAGCTCAAGATCATTACGGCCAATATAACCTGTTTTTCAGGCAGGCTTCTCAAGACAATCCTCATCGAGGCAGACGAAGAAGAGAAAGACCATTTGCAGTTAAAAATCCAAACGGCCATTGCAGCTCTCAATGATCCTCAAAGCCCTATGAGTATCTGA 747 0.4806 MENIGEEYRHYCETNMFYQTEELYSWGLGDEAFSGYYDSSSPDGTASSAASKNIVSERNRRKKLNDRLFALRSVVPNISKMDKASIIKDAIEYIQHLHEQEKSIEAEITELESGKQMMKNSSNFDFETDLPVLLRSKKKKTEQQLLSDSVISSRNSPIEVVELRVTYMGERTIVVSLTCSKRTDTMVKLCEVFESLKLKIITANITCFSGRLLKTILIEADEEEKDHLQLKIQTAIAALNDPQSPMSI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1381 248 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 46 233 - -
Bisa08g1381 248 Coils Coil 218 238 - -
Bisa08g1381 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Bisa08g1381 248 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Bisa08g1381 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 114 IPR036638 GO:0046983
Bisa08g1381 248 Gene3D - 44 114 IPR036638 GO:0046983
Bisa08g1381 248 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 45 116 - -
Bisa08g1381 248 SMART finulus 54 103 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1381 Bisa-ChrBisa08 28696683 28700870 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1381 1 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.393 1.23e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1381 HLH 8.4e-13 No_clan