Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1378 ATGGACAATATTGGTGAAGAGTACATGCATTACTGCGAGACCAACATGTTCTATCAAACCGAAGACCTCTACAGCTGGGGACTTGGCGACGAGGCTTTCTCCGGCTACTACGATTCGAGCTCGCCAGACGGCGCGGCATCGTCGGCTGCGTCGAAGAACATTGTGTCGGAGAGGAACCGGAGGAAGAAGCTGAACGATAGGCTCTTTGCTCTTAGAGCCGTCGTCCCCAACATCAGCAAGATGGACAAGGCTTCGATAATTAAGGATGCTATAGAGTACATCCAACACTTGCACGAGCAAGAGAAGAGTATTGAAGCCGAGATCACAGAGCTGGAATCTGGGAAGCAGATGATGAAAAACTCGAGCAATTTTGACTTCGAAACAGACCTCCCTGTTCTGCTGAGGTCCAAGAAGAAGAAAACAGAGCAGCAACTACCGTCCGATTCCGTCGTCAGCTCGAGAAATTCCCCAATTGAAGTCCTTGAGCTGAGGGTAACATACATGGGAGAGAGGGCGATTGTGGTGAGCTTGACGTGTAGTAAGAGGACGGACACAATGGTGAAACTGTGCGAAGTGTTCGAGTCTCTGAAGCTCAAGATCATTACGGCCAATATAACCTGTTTTTCGGGCAGGCTTCTCAAGACAGTCTTCATCGAGGCAGACGAAGAAGAGAAAGACCATTTGCAGTTAAAAATCCAAACGGCCATTGCAGCTCTCAATGATCCTCAAAGCCCTATGAGTATCTGA 747 0.4873 MDNIGEEYMHYCETNMFYQTEDLYSWGLGDEAFSGYYDSSSPDGAASSAASKNIVSERNRRKKLNDRLFALRAVVPNISKMDKASIIKDAIEYIQHLHEQEKSIEAEITELESGKQMMKNSSNFDFETDLPVLLRSKKKKTEQQLPSDSVVSSRNSPIEVLELRVTYMGERAIVVSLTCSKRTDTMVKLCEVFESLKLKIITANITCFSGRLLKTVFIEADEEEKDHLQLKIQTAIAALNDPQSPMSI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1378 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Bisa08g1378 248 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 47 233 - -
Bisa08g1378 248 Coils Coil 218 238 - -
Bisa08g1378 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 114 IPR036638 GO:0046983
Bisa08g1378 248 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Bisa08g1378 248 Gene3D - 45 114 IPR036638 GO:0046983
Bisa08g1378 248 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 44 116 - -
Bisa08g1378 248 SMART finulus 54 103 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1378 Bisa-ChrBisa08 28621499 28626817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1378 2 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 63.964 9.26e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g1378 HLH 1.7e-12 No_clan