Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1372 ATGTCTGCGTGTTTTAGCGGAGCCAGTGGAAGAACCTACGGGTTCGATTTCGAATATGTCAAATCTCCATCTACATCAACTCGAACATCGCATATGTCTTCTTCTCCTTCTTCAACTATCTCTGAATCCGGCGATTCCCCACTCACAATCTCCACTCGAAAACCTCGAACTCCTAGAAAGCGGCCGAACCAAACTTACAATGAAGCTGCTGCGATGCTTTCCTCTGCATACCCAAATCTCTTCCCCACCGTAAGCCTAAAAAAACCAGGCAAATTCACCAAATCAAACGATGCTAATTTTTGGGACGAATCTCCAGAATTGTTATTGCCTTTCCGAGTCTTTGATGGCTCCTCTTTCCTGCTCCAACACAAGCCTGATTTTCCAATGGAGCCCAGAGCTGTTAGTCTACAAGAAAAATCGTGCCAGAGTCCCCGCGACGGTGAGATTAGCTCACGAGTGAATACTTTGGAATTTGTCAACGATGATTGTCGAGAAGATTTCGATGCTGAATCAATTCTCGATGAGGAAATCGAAGAGGGAATCGATAGCATCATGGGGAGCAGGGTCGAAGATTCCAAGGACGCGAGCAGTCATGGCGAACACGTGAGTCCTTGGACCGGGGATTCTACGGGATTCGGTTTTGGCGGGAAATTCGATTTCCGACGAAGAGCTTTCCGAGGAGTCGATGAAGGGAATAATTGGTGGAATTTTTCTGCTGTTGTTGATATACTTGAAATCACACCGAAAATAAAAGAGCCTCCTCTTCCTGCGGCGTCGGCCTTGCCGGAGACAAAGAAGAAGAAGAAGAAGAAGACAAAGAAGGTCGATAAGTTGATGACCACAGAATTGAAGAACTTGAAATTGCCGAAAGAGAGTTCGATTGTGAAATCAAATCATGGTTTGCTGTTAAAATTGAATTACAACGGGGTTTTGAATGCTTGGTCCGACCGGGGTTCACCTTTTGTCGGCGAAAGTCCGCGCTCCGATATGCCCGGAAATGATGTGACGGCGCGGCTGGCTGAGATAGATTTGTTCTCGGAAAACGGAGGAGTCATGAGAGAAGCTAGCGTCCTTCGCTACAAAGAGAAGCGTCGTACCCGCCTCTTCTCTAAGAAGATCAGATACCAGGTCAGGAAGGTCAACGCCGATGGACGGCCCAGATTGAAGGGGCGATTCGTTGGGAGGGCTAATTGTTGCTCAAATGCACTAAGATCATAA 1218 0.4713 MSACFSGASGRTYGFDFEYVKSPSTSTRTSHMSSSPSSTISESGDSPLTISTRKPRTPRKRPNQTYNEAAAMLSSAYPNLFPTVSLKKPGKFTKSNDANFWDESPELLLPFRVFDGSSFLLQHKPDFPMEPRAVSLQEKSCQSPRDGEISSRVNTLEFVNDDCREDFDAESILDEEIEEGIDSIMGSRVEDSKDASSHGEHVSPWTGDSTGFGFGGKFDFRRRAFRGVDEGNNWWNFSAVVDILEITPKIKEPPLPAASALPETKKKKKKKTKKVDKLMTTELKNLKLPKESSIVKSNHGLLLKLNYNGVLNAWSDRGSPFVGESPRSDMPGNDVTARLAEIDLFSENGGVMREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRLKGRFVGRANCCSNALRS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1372 405 ProSiteProfiles CCT domain profile. 353 395 IPR010402 GO:0005515
Bisa08g1372 405 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 12 398 - -
Bisa08g1372 405 MobiDBLite consensus disorder prediction 22 53 - -
Bisa08g1372 405 Pfam CCT motif 353 393 IPR010402 GO:0005515
Bisa08g1372 405 MobiDBLite consensus disorder prediction 189 208 - -
Bisa08g1372 405 MobiDBLite consensus disorder prediction 253 273 - -
Bisa08g1372 405 MobiDBLite consensus disorder prediction 22 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1372 Bisa-ChrBisa08 28449349 28452972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1372 301 397 C2C2-CO-like Transcription Factor Family AT1G73870 47.788 7.83e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa08g1372 CCT 1.8e-17 CL0281