Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1366 ATGGCACTCATTGGGTTGCGACTCCTAAACACTCTGGGTCGAAACCCACTCGCCATGGCACCAGCGGCGCTGTCACCGTCGCCGTCCGGCACCACCATCTTTGGGAAATACAAACTGACTAATCTACTCGGTCGCGGCAGCTTCGCCAAGGTCTATCACGCGATATCCCTGATCGACGGCTCCCACGTCGCCGTTAAGATTATCGACAAGCTCAAAACCGTGACAGCCTCCATGGAACCTAGAATCATCCGTGAAATCAACGCCATGCGCCGCCTCCACCCCCACCCGAACATCCTCAAAATCCATGAAGTGATGGCCACCAAAACCAAGATCTACCTCGTCGTGGAGTTCGCCGGCGGCGGCGACCTCTTCTCGAAAATCACGCGCAGAGGCAGGCTACCGGAATCGATGGCGCGCCGTTACTTCCAGCAATTGGTCTCCGCTCTCTGTTTCTGCAACCAAAACGGCGTCGCTCACCGGGACATCAAGCCCGAGAACCTCCTCCTGGACGAACACGGGAATCTTAAGGTCTCGGACTTCGGGCTCTCCGCTTTACCCGAACATATCAAAAACGGGTTGCTCTCCACAACATGTGGCACGCCGGCGTACACAGCGCCGGAGATTCTCCGACGGAAATGCTACGACGGATTCAAAGCCGACGCGTGGTCGTGCGGGCTCATACTATACGTCCTGCTCGCTGGCCGTCTCCCATTCAACGATTTCAACATCGCGGCGATGTTCATGAAGATTTGCTCGCGCGATTATGAGTTCCCAGCCTGGATCTCGAAGCCGGCGCGATTCGTGATCCGCAATCTTCTCGACCCGAACCCGGACACGAGGATGAGTTTGGAAGCTCTGTTTCAAAACCCGTGGTTCAAGAAATCACTGAAACCCGAAACCGAAAAGAGCGTATTCGAATCTGAATCATACGCGAAATCTAACTTTCAAAAACGGGAAGAGAATATTAGTGGTGCGGGATTGAATGCTTTTGATATAATCTCGATGTCATCGGGTCTGGATTTGAGGGGGTTGTTTGAAACGACGTCTGAGCAGAGGATGGGGAGGAGGTTCACATCGAATGCGAAATCGGAGGTGGTGGCAGAGAAGGTGAAGGAAATCGGAGGGGGATTAGGGTTTAGGGTTGAATTGGGGAAGAACGGGTCAATTGGATTAGGGAAAGGGAAGGTGGTTTTGGTAATTGAGGTTTCAGAGATTGTTGCAGAGTTGGTTTTGGTGGATTTGACAGTGGTGGATGGTGGATCAGAGTTTGAGGAACTTTACTGGAGAGATTGGAAAGCTCGGCTTCAAGATATTGTTCTTTCTTGGCACAACGAAGCGTCATGA 1344 0.5253 MALIGLRLLNTLGRNPLAMAPAALSPSPSGTTIFGKYKLTNLLGRGSFAKVYHAISLIDGSHVAVKIIDKLKTVTASMEPRIIREINAMRRLHPHPNILKIHEVMATKTKIYLVVEFAGGGDLFSKITRRGRLPESMARRYFQQLVSALCFCNQNGVAHRDIKPENLLLDEHGNLKVSDFGLSALPEHIKNGLLSTTCGTPAYTAPEILRRKCYDGFKADAWSCGLILYVLLAGRLPFNDFNIAAMFMKICSRDYEFPAWISKPARFVIRNLLDPNPDTRMSLEALFQNPWFKKSLKPETEKSVFESESYAKSNFQKREENISGAGLNAFDIISMSSGLDLRGLFETTSEQRMGRRFTSNAKSEVVAEKVKEIGGGLGFRVELGKNGSIGLGKGKVVLVIEVSEIVAELVLVDLTVVDGGSEFEELYWRDWKARLQDIVLSWHNEAS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1366 447 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1366 447 Gene3D Phosphorylase Kinase; domain 1 30 123 - -
Bisa08g1366 447 SUPERFAMILY Protein kinase-like (PK-like) 33 306 IPR011009 -
Bisa08g1366 447 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Bisa08g1366 447 CDD CIPK_C 328 432 - -
Bisa08g1366 447 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Bisa08g1366 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Bisa08g1366 447 Gene3D Kinase associated domain 1, KA1 324 440 - -
Bisa08g1366 447 FunFam Non-specific serine/threonine protein kinase 27 317 - -
Bisa08g1366 447 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1366 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 31 385 - -
Bisa08g1366 447 Pfam NAF domain 327 382 IPR004041 GO:0007165
Bisa08g1366 447 Gene3D Transferase(Phosphotransferase) domain 1 124 321 - -
Bisa08g1366 447 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1366 447 FunFam Aurora kinase A 30 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1366 Bisa-ChrBisa08 28131563 28132906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1366 15 445 Miscellaneous Gene Families AT3G23000 56.621 3.49e-163 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa08g1366 Pkinase 2e-65 CL0016