Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1365 ATGGAGCAGACGAGGGACTACGAGAAGGAGAAGGATCTGAATCTGAAGGCCACAGAGCTCACTCTGGGATTACCAGGAACAGAGGAGAGCTTTAGAAACAACAAAAGGCCATTGCCTCACACTCCCCAACAACACAGCTCAACTCAATCTGTTTCTCCCAATGTGGACTCTCCTTCCAATGTAAAAATAGTGGGGTGGCCACCAATAAGGTCTTACAGGAGGAACAACATGAAGGAGGGAGAGGGAAGTGGGAATGGAATGTATGTGAAAGTGAGCTTGGATGGAGCTCCTTACCTTAGAAAGATTGACTTGAGGCTTTACTCAGGCTATCCTCACCTCCTCAATGCCCTTCAAAACATGTTCTACTTAACCATAGCTAAGTACTGTGAAAGAGAGGGATACAAGGGATCAGAATATGCACCAACCTATGAAGACAAGGAGGGTGACTGGATGCTACTTGGAGATGTTCCATGGGATATGTTTGTGAGTTGCTGCAAGAGGTTGAGGATCATGAAAGGATCAGAAGCTAAGGGCTTTGGTTGTGGTGTATGA 552 0.462 MEQTRDYEKEKDLNLKATELTLGLPGTEESFRNNKRPLPHTPQQHSSTQSVSPNVDSPSNVKIVGWPPIRSYRRNNMKEGEGSGNGMYVKVSLDGAPYLRKIDLRLYSGYPHLLNALQNMFYLTIAKYCEREGYKGSEYAPTYEDKEGDWMLLGDVPWDMFVSCCKRLRIMKGSEAKGFGCGV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1365 183 MobiDBLite consensus disorder prediction 36 59 - -
Bisa08g1365 183 MobiDBLite consensus disorder prediction 1 59 - -
Bisa08g1365 183 MobiDBLite consensus disorder prediction 1 16 - -
Bisa08g1365 183 Pfam AUX/IAA family 44 179 IPR033389 -
Bisa08g1365 183 SUPERFAMILY CAD & PB1 domains 82 172 - -
Bisa08g1365 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 13 177 IPR003311 GO:0005634|GO:0006355
Bisa08g1365 183 ProSiteProfiles PB1 domain profile. 86 173 IPR000270 GO:0005515
Bisa08g1365 183 FunFam Auxin-responsive protein 81 183 - -
Bisa08g1365 183 Gene3D - 81 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1365 Bisa-ChrBisa08 27998988 28000501 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1365 77 182 B3 DNA Binding Superfamily AT4G23980 28.302 1.23e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa08g1365 AUX_IAA 4e-48 CL0072