Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1362 ATGGGGAATAAGGAGCTGAAGGAGACAGAGCTGTGTCTGGGATTGCCGGGAACTCCCAAGGCCACCGGAAAGAGAGGGTTCTCGGAGACCCTTGATCTGAAGCTGAATCATGAATCGGTGGAGGATCTGATGAACGAGAGGACCAACAATAATATTGTGTCAAAGAAAACCAACCTCCTTAGCCACCCAGCACCAGCAGCTAAGCCACCCCCCAAGGCACAGGTAGTGGGATGGCCACCGGTGCGATCGTACAGGAAGAACGTGATGGCACAAAAGGTTAACGGCGACGGAGATGGAGACGGCGGGGAGAAGGCAAGCGGTGGCGGCGGTGGGGCGCTGGTGAAGGTTTGCATGGACGGAGCTCCATACCTTCGGAAGGTGGACTTGAAATTGTACCAAAGTTACCAACAATTATCTTATGCTTTGGCCAAAATGTTTAGCTCCTTCACGGGGGAAGGAAAGTATGGGGCCGAAGCAGGAATGATAGACTTCATGAATGAGAGGAAGTTGATGGATGTGTTGAACAGTTCTGACTATGTGCCAACCTATCAAGATAAGGATGGTGACTGGATGCTCGTGGGCGACGTCCCTTGGGAGATGTTTGTTGAGTCATGCAAGCGCCTGCGAATAATAAAAGGATCAGAAGCTATGGCCTTGCGCCAAGAGCCATGCAAAAATGCAAAAGCAGAAGCTAAGCCTGCATCAGAAATATCTTGTAAAATTAAGGTGTAA 732 0.5027 MGNKELKETELCLGLPGTPKATGKRGFSETLDLKLNHESVEDLMNERTNNNIVSKKTNLLSHPAPAAKPPPKAQVVGWPPVRSYRKNVMAQKVNGDGDGDGGEKASGGGGGALVKVCMDGAPYLRKVDLKLYQSYQQLSYALAKMFSSFTGEGKYGAEAGMIDFMNERKLMDVLNSSDYVPTYQDKDGDWMLVGDVPWEMFVESCKRLRIIKGSEAMALRQEPCKNAKAEAKPASEISCKIKV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1362 243 Gene3D - 108 225 - -
Bisa08g1362 243 FunFam Auxin-responsive protein 107 223 - -
Bisa08g1362 243 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 216 IPR003311 GO:0005634|GO:0006355
Bisa08g1362 243 ProSiteProfiles PB1 domain profile. 111 218 IPR000270 GO:0005515
Bisa08g1362 243 SUPERFAMILY CAD & PB1 domains 106 210 - -
Bisa08g1362 243 Pfam AUX/IAA family 22 219 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1362 Bisa-ChrBisa08 27975237 27977986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1362 10 220 B3 DNA Binding Superfamily AT2G46530 25.592 5.05e-07 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa08g1362 AUX_IAA 8.8e-73 CL0072