Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1355 ATGGGTTCTCTTTCCTTTTTGCTCTTACGGCCGTCAGCTGCTTCGGAGAAGCTCCTGTTCTCCGCAACTTCAGCCATGGCCGTTGGAAAGAACAAGAGGATTTCGAAGGGGAAGAAGGGTGGCAAGAAGAAGGCAGTTGATCCCTTTGCTAAGAAGGACTGGTACGATATCAAGGCCCCTTCTGTTTTCCAAGTGAAAAACGTGGGCAAGACCCTCGTCACTCGTACGCAGGGGACCAAGATTGCTTCGGAAGGACTTAAGCATCGAGTGTTTGAGGTTTCATTGGCTGATCTACAAGGTGATGAGGACCATGCATACAGGAAGATTCGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTGACAAATTTCTGGGGAATGGACTTTACAACTGACAAGTTGAGGTCATTGGTGCGGAAATGGCAAACTCTAATCGAAGCTCATGTGGATGTGAAGACCACTGACAATTACACATTGAGACTGTTCTGCATTGGATTTACTAAGAGACGTGCAAACCAGGTGAAGAGAACCTGTTATGCGCAATCAAGCCAGATTAGACAGATTCGCCGAAAGATGAGGGAGATCATGGTAAATCAGGCAACATCCTGTGATTTGAAAGAGTTGGTCCGTAAGTTCATCCCTGAGTTGATTGGCAAAGAGATTGAGAAGGCAACATCCAGCATTTATCCTCTACAAAATGTTTTCATTAGGAAAGTCAAGATTTTGAAAGCTCCCAAGTTTGATCTTGGAAAACTGATGGAGGTTCATGGTGATTATTCAGAAGATGTTGGTGTGAAGGTTGACAGACCTGCAGATGAAACAATGGCTGAGGGGACCCCTGAAGTCATCGGGGCTTGA 861 0.4576 MGSLSFLLLRPSAASEKLLFSATSAMAVGKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIGFTKRRANQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPELIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEGTPEVIGA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1355 286 ProSitePatterns Ribosomal protein S3Ae signature. 86 98 IPR018281 GO:0003735|GO:0005840|GO:0006412
Bisa08g1355 286 SMART Ribosomal_S3Ae_2 40 246 IPR001593 GO:0003735|GO:0005840|GO:0006412
Bisa08g1355 286 Pfam Ribosomal S3Ae family 41 246 IPR001593 GO:0003735|GO:0005840|GO:0006412
Bisa08g1355 286 PANTHER 40S RIBOSOMAL PROTEIN S3A 22 277 - -
Bisa08g1355 286 Hamap 40S ribosomal protein S1 [RPS3A]. 26 283 IPR027500 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1355 Bisa-ChrBisa08 27848492 27853639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1355 26 286 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.405 3.33e-165 457