Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1354 ATGGAGACGAAAGAGGAGGAATGGAAACAAAAAGAAGGAACAACAACGACAAATCTGCCGGTTCTTTTCGCTTCGAATGGCGGTGATGACGACTTGCGCGATGCCCACTATGTCTTGTGTGGAAGGCCAGAGGCTTTGATTCTTGAAAGCTTCAAAGGCGTTTGGACACCAGAGATGGAATTAGAACCAGAAGGAGCTGAGAAGTCAAAGACGAAGGATGTTGGAAGCCAGAGCAGTAAAGATATGATCTTCAGAGCCGATATGATTGATCTGAAAAGTTTGGATGCTCAGCTGGAAAGGCACTTAACCAAAGCTTGGTCGAAGAGAATTGATCAGAACAGGCCTAGAGAAGAATGGGAGATCGATTTGGCCAAATTGAATATACAATATGTTATTGCTCATGGTGCCTATGGCACTGTCTACAGGGGTAACTATGATGAGAAAGAAGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTTTCCACAGCTGCTGAAACTGCTGCTCTACGGGCATCATTTCAGCAGGAGGTTTCTGTCTGGCACAAACTTGACCATCCAAATGTCACTAAATTTATTGGAGCTTCAATGGGAACTTTAAATCTTAAGATTCCATCAAATAGCTCTTCAAATGCTGGTGAAAATGCCCCTCCATCTAGGGCATGTTGTGTTGTTGTCGAGTATCTATCTGGTGGGACCCTAAAACAGTTCTTGATAAAGAATTGGCGGAACAAACTTGCTTTTAAGGTTGTGGTCCAGCTAGCTTTGGACCTCGCTAGGGGACTTAGCTATCTACATTCAAAGAAGATTGTACACCGTGATGTCAAAACAGAGAATATGTTGCTAGATCGTGACAGAAATCTAAAAATAGCTGATTTCGGTGTTGCCCGTGTTGAAGCCATGAATCCGAGTGACATGACAGGCGAAACTGGAACCCTTGGATATATGGCGCCGGAGGTTCTGGAGGGTAAGCCTTACAACAGAAGATGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCCTATCCAAATCTTAGCTTTACTGATGTATCAACTGCCGTTGTTGGTCAGAATTTACGGCCAGACATTCCAAGATGTTGCCCAAGTTCTTTTTTAAATATATTGAAGAAATGTTGGGACGGGAATCCAAACAAACGTCCAGAGATGAGTGAGGTGGTGAGGATGCTGGAAGCCATTGATACCAGCAAAGGGGGAGGAATGATACCTGAAGATCAATCTCCTAACTGTTTCTGTTTTGCCCCCTCTCGTGGCCCTTGA 1302 0.4424 METKEEEWKQKEGTTTTNLPVLFASNGGDDDLRDAHYVLCGRPEALILESFKGVWTPEMELEPEGAEKSKTKDVGSQSSKDMIFRADMIDLKSLDAQLERHLTKAWSKRIDQNRPREEWEIDLAKLNIQYVIAHGAYGTVYRGNYDEKEVAVKVLDWGEDGVSTAAETAALRASFQQEVSVWHKLDHPNVTKFIGASMGTLNLKIPSNSSSNAGENAPPSRACCVVVEYLSGGTLKQFLIKNWRNKLAFKVVVQLALDLARGLSYLHSKKIVHRDVKTENMLLDRDRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLEGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFTDVSTAVVGQNLRPDIPRCCPSSFLNILKKCWDGNPNKRPEMSEVVRMLEAIDTSKGGGMIPEDQSPNCFCFAPSRGP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1354 433 FunFam Serine/threonine-protein kinase HT1 230 415 - -
Bisa08g1354 433 Gene3D Phosphorylase Kinase; domain 1 115 207 - -
Bisa08g1354 433 Pfam Protein tyrosine and serine/threonine kinase 127 404 IPR001245 GO:0004672|GO:0006468
Bisa08g1354 433 ProSiteProfiles Protein kinase domain profile. 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1354 433 PRINTS Tyrosine kinase catalytic domain signature 375 397 IPR001245 GO:0004672|GO:0006468
Bisa08g1354 433 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Bisa08g1354 433 PRINTS Tyrosine kinase catalytic domain signature 265 283 IPR001245 GO:0004672|GO:0006468
Bisa08g1354 433 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Bisa08g1354 433 CDD STKc_MAP3K-like 132 404 - -
Bisa08g1354 433 SUPERFAMILY Protein kinase-like (PK-like) 112 404 IPR011009 -
Bisa08g1354 433 MobiDBLite consensus disorder prediction 1 21 - -
Bisa08g1354 433 FunFam Kinase suppressor of Ras 1 115 209 - -
Bisa08g1354 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Bisa08g1354 433 Gene3D Transferase(Phosphotransferase) domain 1 231 418 - -
Bisa08g1354 433 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 94 407 - -
Bisa08g1354 433 SMART serkin_6 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1354 Bisa-ChrBisa08 27829486 27835734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1354 58 433 MAP Kinase Kinase Kinase AT3G22750 73.210 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa08g1354 PK_Tyr_Ser-Thr 5.3e-59 CL0016