Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1353 ATGTGGTCCGCTTTGTGGGTTCGCGATGTTTTGAAGTCCAGACTTCATGAGAGTATTGACTTGATTTCTGGGTTGCTGCGTCCCTGCATGTATTTGATTACGCTTTGTTGTGGGTTACTGTTGAATTCCAGTGGGATTCGCTTCTTCCTCAATTGCAACTGCTTTGAGGGCACAAAGTTCACAATCGAGCTACCACAAGCCTTGAATTATGATTCTGGTAGCCCTGGTTCTAATCCTACAAATTGTAGTGATGAGACAAATTCTCTTTTGGAGTTGCCTGGTGAGTTGGCATCAGATGTTATCTGTGTTCATGAAGCCCCTGAAAAAGATGCAGCTAAGTGTGAGGTGCCTCTCCAGGGATTACATCAGAATGAGCCAGAAATTAAAGCGCAAGGATGTAATTGGGAGAGCCTAATTCCTGATGATGCTGATCTGTTAATTTTTAACTCCCCCAACGAAACAGAAGCTTTTAAGGATCTAATGCAGAAATCATTGGACCCCACAATGCAACTGAGCAACTTTATGTCCCAGTTACCACAAACTACCATCAATAATGGCAGGAAAATGCACTTTGTTAATCAAGTTGCTTCTGTTTCAGTGCATGAAATTGAAGATCATCCTTCCAAACCTGAGGACGCCACTGACACAGACCAAATGCAGGACAATCTTTCTCATGTTGCTGTCATGGATAGCAATCTGAGTGAGAAAATGGATGGGCATCTATGTATAACACATCATGGAACACGGAGGCGCTGTCTAGACTTTGAGTTGGCTGGGATGCGAAGGAATTCAAGTATCAGTTCCAGTACATTTCAATCTGATGAGGACAATGTTCTTAACGATAAGCAGCTGCTTCCTACAAAACACAATGTTGATTCACAGAGGTGCATTTTGCCTGGAATTGGTTTACACTTGAATGCTCTATCAACCTTAAAAGATTACAAAATGATAAATGACGAAGATTTTCCTTCTGGAAGACAACTCGGTCTACCCAACTCTGCTTCTTCCTTGCATCTTCCTGCAAGCCAACAACATTATCAAATATCATCAGTGCGCAAGTTGGAGCTAGCTGGGGAAGGTGAAGCTTGCAAGCGCTGTAATTGTAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTATCTACTGCATAGAACCTTGCTCCTGTCAGGGTTGCTTCAACAAACCAATTTATGAAGATACTGTGCTTGCAACTCGCAAGCAGATTGAGTCTCGCAACCCTCTTGCATTTACTCCAAAAGTCATCATTAGTGCTGATTCTTTACCTGAATTTGGGGCTGACCCCAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAGAAATCTGGCTGCCTAAAGAAATATTGTGAATGTTTTCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAACGCATATGGTAGTAAGGATGGCTCTACTTTAGGAATAGAACTTGAACCAGAAGAAAAAGAACCGTGTGAAAAGCGTGGAGTGGAAAAGGCTTTACAGGAAACTGAAATTCAGAATAATGAAGACCATCCAGATTCTGCTCTTCCCAGAACACCTTTACGGTTTTGCAGATCATTGCTTCCGTTGCCCTTTCCATCCAAGGGAAAGCCACCAAGATCTTCTATGACTACAACACCTGCTTCCACATTATATGCCAGCCAAAATCTAGTGAAACCCAGTATTCTTCGGTCTCAAACGAAGTTTGTGAAGACTTTCCAAACCATTCCAGAAGATGAAATACCAGAGAATTTCCATGGTGATGCCTCTCCTATCACCTGCATCAGGACTTCTCCCAATGGCAAGAGGATATCCTCTCCCACCTGTGCCTCTGGATCATCTCCTACTCGCAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCTTCATTTCCTCCTCTCACCCCACGCCAGTAA 1962 0.4322 MWSALWVRDVLKSRLHESIDLISGLLRPCMYLITLCCGLLLNSSGIRFFLNCNCFEGTKFTIELPQALNYDSGSPGSNPTNCSDETNSLLELPGELASDVICVHEAPEKDAAKCEVPLQGLHQNEPEIKAQGCNWESLIPDDADLLIFNSPNETEAFKDLMQKSLDPTMQLSNFMSQLPQTTINNGRKMHFVNQVASVSVHEIEDHPSKPEDATDTDQMQDNLSHVAVMDSNLSEKMDGHLCITHHGTRRRCLDFELAGMRRNSSISSSTFQSDEDNVLNDKQLLPTKHNVDSQRCILPGIGLHLNALSTLKDYKMINDEDFPSGRQLGLPNSASSLHLPASQQHYQISSVRKLELAGEGEACKRCNCKKSKCLKLYCECFAAGIYCIEPCSCQGCFNKPIYEDTVLATRKQIESRNPLAFTPKVIISADSLPEFGADPNKTPASARHKRGCNCKKSGCLKKYCECFQGGVGCSISCRCEGCKNAYGSKDGSTLGIELEPEEKEPCEKRGVEKALQETEIQNNEDHPDSALPRTPLRFCRSLLPLPFPSKGKPPRSSMTTTPASTLYASQNLVKPSILRSQTKFVKTFQTIPEDEIPENFHGDASPITCIRTSPNGKRISSPTCASGSSPTRRSGRKLILQSIPSFPPLTPRQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1353 653 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 79 651 IPR044522 GO:0003700
Bisa08g1353 653 MobiDBLite consensus disorder prediction 611 653 - -
Bisa08g1353 653 ProSiteProfiles CRC domain profile. 362 487 IPR005172 -
Bisa08g1353 653 MobiDBLite consensus disorder prediction 611 638 - -
Bisa08g1353 653 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 450 485 IPR005172 -
Bisa08g1353 653 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 364 399 IPR005172 -
Bisa08g1353 653 SMART CXC_2 361 402 IPR033467 -
Bisa08g1353 653 SMART CXC_2 447 488 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1353 Bisa-ChrBisa08 27795020 27800523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1353 94 653 CPP Transcription Factor Family AT4G14770 44.518 3.59e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bisa08g1353 TCR 5.4e-12 No_clan