Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1335 ATGTTTCCCAGCTGTTACAGGGGAGAGTATCCGTCGCCGAAGCCGAAGAAAGTTGTTGCGACGAAGCAGAGTTCCTTCCACAGGATATCGGTGTCGGATTTGAGCTTGAGCAATCCGAGCGCGACGACGCTATCGGAGGATCTGTCTATCTCTCTCGCCGGATCTAATTTGCATGTTTTCACGCTCGCGGAGCTCAAGCTCATCACCCATGGCTTCTCTTCTAGTAACTTCCTCGGAGAAGGCGGGTTCGGGCCCGTGCATAAGGCTTTTATCGATGATAAGCTCAGGCATGGGCTTAAGGCTCAGACCGTCGCTGTTAAGCTCCTGAACCTCGATGGCTCCCAGGGCCACAAAGAGTGGTTGACGGAAGTTGTATTTCTGGGGCAACTAAGGCATCCACATCTTGTAAAGCTGATAGGGTATTGCTGTGAAGAAGAACACAGGCTTCTGGTGTATGAATATTTACCAAGAGGCAGCTTAGAGAATCAACTATTTAGAAGATACTCAGTATCATTACCATGGTCAACGAGAATGAAAATTGCTGTAGGAGCTGCGAAGGGTCTAGCTTTTCTTCATGAAGCAGAGAAACCCGTCATATACAGAGACTTCAAAGCCTCAAACATCTTATTAGACTCAGATTACAAAGCAAAGCTGTCAGATTTTGGGTTGGCGAAAGATGGCCCTGAAGGAGATGACACCCACGTGTCAACCCGAGTTATGGGCACCCAAGGCTATGCTGCCCCTGAATATGTCATGACAGGTCACTTGACAGCAAAGAGTGATGTGTACAGCTTCGGAGTGGTGTTACTGGAGCTGCTAACAGGAAGGAGATCAGTGGACAAAACACGGCCTCAGAGAGAGCAGAACCTAGTAGAATGGGCGAGGCCCATGCTGAACGACCCGAGGAAGATGGGCCGGATCATGGACCCAAGACTCGAGGGCCAGTTCTCGGAGATGGGTGCGAGAAAAGCCGCGGCACTGGCGTACCTGTGCCTGAGCCACAGGCCCAAGAACAGACCCTCCATGACTGCCGTGGTGAAGACCCTCGAGCCTCTCCAGGACTTCGACGACGTGCCCATCGCGCCCTTCGTGTACACGGTCCCACCCGATGGCCACTCCAAGGAGAGTGAAACGCCGGCGAGAGAGAGAAAGAGGGAGAGTAACGGTCATAACCGTCAGCGGAAGCACCCTCTCAGATCCCCGAAGTCACGGAGTGGGAGAAGAAGTGGGTCTCACTCGCCGTCGGATCATCAGCATCAGGAATCCAAGGGAGAGTAG 1278 0.525 MFPSCYRGEYPSPKPKKVVATKQSSFHRISVSDLSLSNPSATTLSEDLSISLAGSNLHVFTLAELKLITHGFSSSNFLGEGGFGPVHKAFIDDKLRHGLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYKAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRRSVDKTRPQREQNLVEWARPMLNDPRKMGRIMDPRLEGQFSEMGARKAAALAYLCLSHRPKNRPSMTAVVKTLEPLQDFDDVPIAPFVYTVPPDGHSKESETPARERKRESNGHNRQRKHPLRSPKSRSGRRSGSHSPSDHQHQESKGE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1335 425 CDD STKc_IRAK 78 352 - -
Bisa08g1335 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Bisa08g1335 425 FunFam Probable serine/threonine-protein kinase PBL8 155 364 - -
Bisa08g1335 425 FunFam Serine/threonine-protein kinase BIK1 39 154 - -
Bisa08g1335 425 MobiDBLite consensus disorder prediction 363 425 - -
Bisa08g1335 425 MobiDBLite consensus disorder prediction 409 425 - -
Bisa08g1335 425 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Bisa08g1335 425 SUPERFAMILY Protein kinase-like (PK-like) 48 350 IPR011009 -
Bisa08g1335 425 ProSiteProfiles Protein kinase domain profile. 72 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1335 425 Gene3D Transferase(Phosphotransferase) domain 1 155 359 - -
Bisa08g1335 425 PANTHER OS01G0588500 PROTEIN-RELATED 42 353 - -
Bisa08g1335 425 MobiDBLite consensus disorder prediction 388 406 - -
Bisa08g1335 425 Gene3D Phosphorylase Kinase; domain 1 36 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1335 Bisa-ChrBisa08 27538074 27541040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1335 58 385 Glycoside Hydrolase AT3G07070 51.198 5.91e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa08g1335 PK_Tyr_Ser-Thr 8.1e-47 CL0016