LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa08g1316	ATGAAGAAAGGAAACTTAGGCCTCAATCTCAAACTCAATGTTCCGGCGTCTGATCAGGTTTCTTTCGCCAAGTTTCTGACTGAAAGCGGGACGTTTAGGGATGGGGATCTACTTGTCAATAGAGACGGAGTTCGAATTGTCTCTAACAGTGAAGTCGAAGCTGCTCCTCCTATCAACCCACTAGACGACCAATTAACTTTGGCAGATGTAGACACAATCAAAGTGGTTGGAAAGGGAAATGGTGGGGTTGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTTGCGCTAAAGGTTATCCCAATGAATATTGAGGAGTCCATGCGCAAGCAGATAGTACAAGAACTTAAAATTAATCAGTCAGCTCAATGTCCATATGTTGTTATTTGCTACCAGTCATTCTATGACAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCTTTAGCAGATCTTCTGAAGAAGGTTAAAACAATTCCAGAGCCATGTCTTGCTGCCATCTGTAAGCAGGTACTGAAGGGTTTACTGTATCTTCACCATGAAAAACATATTATCCACAGGGACTTAAAACCTTCTAATCTGTTGATAAACCATAGAGGCGAAGTAAAGATCACTGACTTTGGTGTGAGTGTGATAATGCAAACCACATCTGGTCAAGCAAATACTTTCATTGGCACATGCAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGAATGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTGATATTGCTCGAGTGTGCTACAGGGCGGTTTCCATATACACCCCCAGATCAAGGTGAAGAATGGGAAAGTATTTTCGAGCTAATTGAAGCCATTGTTGATAAACCTCCTCCGATTGCTCCATCTGATCAATTTTCACAGGAATTCTGCTCTTTTATCTCTGCATGTTTACAGAAAGACCCAAAAGATAGACTGTCGGCTCAGGAACTTATGTCGCATTCTTTTGTCAACCTATACGGGGACTCCGATGTAGATCTTTCAGCTTACTTCACCAAATCAGGATCTCCACTAGCAACTTTACCTACTCCTACCTGGTATGTTTCAAACCCGGACTTTTTCAAACTTGAAGTGTATAAATCATTTGTTTGCTTTATGTACCTTTTTACCCAATATTGTTGA	1167	0.4087	MKKGNLGLNLKLNVPASDQVSFAKFLTESGTFRDGDLLVNRDGVRIVSNSEVEAAPPINPLDDQLTLADVDTIKVVGKGNGGVVQLVQHKWTNQFFALKVIPMNIEESMRKQIVQELKINQSAQCPYVVICYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPCLAAICKQVLKGLLYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMQTTSGQANTFIGTCNYMSPERINGSQNGYNYKSDIWSLGLILLECATGRFPYTPPDQGEEWESIFELIEAIVDKPPPIAPSDQFSQEFCSFISACLQKDPKDRLSAQELMSHSFVNLYGDSDVDLSAYFTKSGSPLATLPTPTWYVSNPDFFKLEVYKSFVCFMYLFTQYC	388

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa08g1316	388	SUPERFAMILY	Protein kinase-like (PK-like)	71	336	IPR011009	-
	Bisa08g1316	388	FunFam	Mitogen-activated protein kinase kinase 6	40	149	-	-
	Bisa08g1316	388	SMART	serkin_6	70	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa08g1316	388	ProSitePatterns	Protein kinases ATP-binding region signature.	76	99	IPR017441	GO:0005524
	Bisa08g1316	388	ProSiteProfiles	Protein kinase domain profile.	70	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa08g1316	388	PANTHER	DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED	64	346	-	-
	Bisa08g1316	388	Gene3D	Transferase(Phosphotransferase) domain 1	150	352	-	-
	Bisa08g1316	388	Pfam	Protein kinase domain	72	332	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa08g1316	388	CDD	PKc_MAPKK_plant_like	85	333	-	-
	Bisa08g1316	388	FunFam	Mitogen-activated protein kinase kinase 6	151	351	-	-
	Bisa08g1316	388	Gene3D	Phosphorylase Kinase; domain 1	48	149	-	-
	Bisa08g1316	388	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	188	200	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa08g1316	Bisa-ChrBisa08	27018937	27022629	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa08g1316	1	327	MAP Kinase Kinase Gene Family	AT4G29810	67.857	5.79e-169	474

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE7	Bisa08g1316		Pkinase	7.8e-70	CL0016