Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1315 ATGCGTGGGGCTATTTCAGAATGTAAAAGTTGTAATTGTATAGGTGGAACTTTGAGGTCTGCACCAGTGAACATCATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGTGCTAGCATGGAGCACCGGAGAAGTTTTTAAAATCAATGGCGAAGAAGTTCATGTTTACACTTCAGATGGGAAAACAGTTGTCACAAATATCTCAAAGACATATACTGGAAATATCCTGATTGCAGTAAACCCATTCCAAAGGTTACCACATCTATATGATACTCATATGATGGAACAATACAAAGGAGCTGAATTTGGAGAGTTGAGTCCCCATGTCTTTGCAGTTGCAGATGTTGCATATAGGGCAATGATAAATGAGGGAAAATGCAACTCAATCCTGGTTAGTGGTGAAAGTGGTGCTGGTAAGACAGAGACAACAAAGATGATCATGCAGTATCTTGCATACCTCGGGGGTCGATCTGGAATAGAAGGGCGGACAGTTGAACAACAAGTTTTAGAATCTAATCCAGTTCTTGAAGCATTTGGGAATGCCAAAACAGTTAGAAACAATAACTCAAGTCGGTTTGGTAAATTTGTTGAGATCCAATTTGACAAGAAGGGGAGGATTTCTGGGGCAGCTATAAGAACCTACTTGCTTGAGAGGTCTCGTGTTTGCCAAATTTCTAACCCTGAAAGAAATTACCATTGCTTTTACCTCCTTTGTGCCGCGCCAGCTGAGGAGAAAGAGAAGTATAAGCTGGGAAGTCCAAGCTCTTTCCATTACTTAAATCAATCCAACTGCTATAAGCTGGATGGAGTAGATGACACACATGAATATCTTGCAACTCGAAGGGCAATGGATGTTGTTGGAATCAGTGAGGAAGAACAGGACGCGATTTTCAGGGTTGTTGCAGCAATTCTACACCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGATTCCTCTGTCATCAAAGATGAGAAGTCTAGATTTCATCTTAACACAACTGCTGAACTTCTGAAATGTGATGCTAAGAGCTTGGAAGATGCACTGATCAAGCGTGTGATGGTAACACCTGAGGAGGTTATTACAAGAACCTTGGATCCTCTGGCAGCTGTTGATAGCAGGGATGCATTAGCCAAAACCATTTATTCACGATTATTTGATTGGCTTGTGGAGAAGATTAACATTTCAATTGGGCAGGATCCTAATTCAAAATCTATTATTGGAGTTCTGGATATCTATGGGTTTGAAAGTTTTAAGATTAATAGTTTTGAGCAGTTCTGTATCAATTTTACAAATGAGAAGCTGCAACAACACTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAGATTGATTGGAGTTACATAGAGTTTGTTGATAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGGGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCCACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAATCGAATAAGCGCTTTATCAAACCTAAACTATCTCGAACTAGTTTTACCATATCTCACTACGCAGGGGAGGTGACATATCTGGCTGATATGTTTCTTGACAAAAACAAGGATTACGTGGTCGCAGAACATCAGGATCTGCTCACAGCCTCAAAATGCTCATTTGTAGCAGGCCTATTCCCCCCTTCTCCAGAGGAGTCATCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGTTACAACTTCAATCTTTGATGGAGACCCTTAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCTATTTTCGAAAATGTCAATATAATCCAACAACTACGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGGCGGACCTTTTATGAGTTTCTTAATAGATTTGGTGTTCATGCCCCGGAAGTTCTGGATGGAAACTATGATGACAAGGTTGCGTGCCAAATGATCCTGAACAAAATGGGTTTGAAAGGCTATCAGACTTACCCCAGGGGCAAGACGAAGGTTTTCCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGAAGAGCAGAGGTTCTTGGAAATGCAGCTAGAATTATCCAGAGGCAGATACGTACTCATATTGCATGCAAAGAATTCAATAAAATGCATCAAGCTGCAGTTCATTTGCAATCTAATTTGCGAGGAAATTCTGACCTATTGGGAAACCCAAATTGGACTCCTGGGATTGTATGCAAGAGGAGGGGTTTGGAGGTCAAAAAGCAAGGCATATTGGCTCGGAAGCTCTATGAGCAGCTGCGGCGTGAAACAGCTTCTCTGAAAATGCAAAAGAACTTCAGAGGATATATTGCTAGGAAATCTTACCTAACAATACGATCATCTGCAATCACATTACAGACAAGTCTAAGGGCAATGAAGGCTCGCAATGAATGTAGATTTAGAAAGCAAACAAAGGCTGCAATTCTTATCCAGGCTCATTTGCGTCGGAAAATTGCATATTCAAATTATAAAAGATTGCAAAAGGCTGCAATTGTTACTCAGTGTGGTTGGAGGCAAAGGGTTGCTAGAAGAGAGCTTAGAAAGCTTAAAATGGCTGATTTGGAAGAGGAAAAAACAGAAGAAATCACTAAGTTACAAGATGCTTTGCATGCAATGCAATTACAAGTAGAAGAAGCAAATGACATGGTCATCAAAGAACGTGAGGCAACTCAGAAAGCCATTGAAGATGCACCTCCTGTTATCAAAGAGGCACCGGTTATAATTCAAGATACTGAAAAAATTAATTCTTTAATGGCTGAGGTCAATAGTTTGAAGGATTCCCTGCTATTAGAAAGAAAGGCTAGAGAAGAAGCCAATGAAGCTCAGTCGGAGGCTGAGGCTAGAAATGCAGAGCTGGTAAAAAAGGTTGAAGATTCTGAGCGCAAAGTGGATCAACTCCAGGAATTGGTTCAGAGGTTAGAAGACAAAATTTCCAATGCAGAGTCAGAAAATCAAGTTCTTCGTAAGCAAGCATTTGCTGTATCGCCAGCTGATAAAGCTCCATCTGCAAGATCAAGATCAGTTATCCAGAGGGCAGCAGAAAATGGGAATACTCCGAATGTTGAAGTGAAAATTGCACCAGACTTGACCCTTGCCATATCAAATCGTGAACCTGAATCTGAGGGAAGACCACAAAAATCTCTCAACGAGAAGCAGCAAGTCCAGGATAATACTGATGTATTAGCATATTGGTTGTCTAATACATCCACTCTGTTGTTGCTTCTCCAACGCACTCTCAAAGCAAGTGGAGCAGCTAGCTTAGCACCACAACGACGAAGAACAACGTCTGCTTCTCTGTTTGGAAGAATGTCTCAGGGATTAAGGGCAGCTCCACAAAGTGTTGGGTTTTCATTTTTAAATGGTAGAGGACTTGGTAGGCTGGATGATTTACGGCAAGTTGAGGCAAAATATCCAGCACTGCTGTTCAAGCAGCAACTTACAGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAGCATTAAAAAGGAGATATCTCCATTACTTGGATTGTGTATCCAGGCTCCAAGGACCTTACGTCAAAGTTTAGTAAAAGGACGCTCACATTCTAATGCTATTGCTCAGCAAGCTTTAATTGCTCACTGGCAAAGAATTGTGGACAGCTTAAACAATTATCTGAAGATAATGAAAGCAAACTATGTGCCTCCATTTTTAGTCCAGAAAGTGTTCACACAAACATTTTCTTTTATCAACGTTCAATTATTCAACAGTCTTTTGTTGCGCCGTGAGTGTTGTTCATTCAGTAATGGGGAGTATGTGAAGACAGGTCTGTCTGAATTAGAACAGTGGTGCATTGTGGCAACTGAGGAGTATGCTGGCTCAGCTTGGGAAGAACTGAAGCATATTAGGCAGGCAGTTGGATTTCTGGTGATACATCAAAAACCCAAAAAGTCCTTAAATGAAATAACTAAGGAGCTTTGTCCTGTTCTCAATATACAACAGTTATACAGAATAAGTACGATGTACTGGGATGACAAATATGGCACACACAGTGTCTCTACAGACGTTATATCAAGCATGAGATCTATAATGTTGGAGGATTCCAATAATGTTGTCAGCACTTCTTTCTTATTAGATGATGACTCAAGCATTCCATTTTCGGTGGATGACATTTCCAAATCAATGCAACAAGTAGATGTAGCTGATGTAGATCCTCCTCCATTAATCCGTGAGAACTCAAGATTTGGGTTCTTACTAGCACGCTCAGAGTGA 4338 0.4053 MRGAISECKSCNCIGGTLRSAPVNIIVGSHVWIEDPVLAWSTGEVFKINGEEVHVYTSDGKTVVTNISKTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAEFGELSPHVFAVADVAYRAMINEGKCNSILVSGESGAGKTETTKMIMQYLAYLGGRSGIEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISNPERNYHCFYLLCAAPAEEKEKYKLGSPSSFHYLNQSNCYKLDGVDDTHEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVIKDEKSRFHLNTTAELLKCDAKSLEDALIKRVMVTPEEVITRTLDPLAAVDSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKINSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASKCSFVAGLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAIFENVNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVHAPEVLDGNYDDKVACQMILNKMGLKGYQTYPRGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHIACKEFNKMHQAAVHLQSNLRGNSDLLGNPNWTPGIVCKRRGLEVKKQGILARKLYEQLRRETASLKMQKNFRGYIARKSYLTIRSSAITLQTSLRAMKARNECRFRKQTKAAILIQAHLRRKIAYSNYKRLQKAAIVTQCGWRQRVARRELRKLKMADLEEEKTEEITKLQDALHAMQLQVEEANDMVIKEREATQKAIEDAPPVIKEAPVIIQDTEKINSLMAEVNSLKDSLLLERKAREEANEAQSEAEARNAELVKKVEDSERKVDQLQELVQRLEDKISNAESENQVLRKQAFAVSPADKAPSARSRSVIQRAAENGNTPNVEVKIAPDLTLAISNREPESEGRPQKSLNEKQQVQDNTDVLAYWLSNTSTLLLLLQRTLKASGAASLAPQRRRTTSASLFGRMSQGLRAAPQSVGFSFLNGRGLGRLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDSIKKEISPLLGLCIQAPRTLRQSLVKGRSHSNAIAQQALIAHWQRIVDSLNNYLKIMKANYVPPFLVQKVFTQTFSFINVQLFNSLLLRRECCSFSNGEYVKTGLSELEQWCIVATEEYAGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVLNIQQLYRISTMYWDDKYGTHSVSTDVISSMRSIMLEDSNNVVSTSFLLDDDSSIPFSVDDISKSMQQVDVADVDPPPLIRENSRFGFLLARSE 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1315 1445 CDD MYSc_Myo11 70 700 IPR036018 -
Bisa08g1315 1445 Gene3D - 229 287 - -
Bisa08g1315 1445 Gene3D - 416 600 - -
Bisa08g1315 1445 ProSiteProfiles IQ motif profile. 790 819 IPR000048 GO:0005515
Bisa08g1315 1445 Coils Coil 966 1025 - -
Bisa08g1315 1445 Coils Coil 886 917 - -
Bisa08g1315 1445 Gene3D - 644 710 - -
Bisa08g1315 1445 FunFam unconventional myosin-Va 841 888 - -
Bisa08g1315 1445 FunFam unconventional myosin-Va 792 840 - -
Bisa08g1315 1445 FunFam Class V myosin 416 557 - -
Bisa08g1315 1445 ProSiteProfiles Dilute domain profile. 1080 1388 IPR002710 -
Bisa08g1315 1445 MobiDBLite consensus disorder prediction 1030 1050 - -
Bisa08g1315 1445 FunFam Myosin heavy chain 229 284 - -
Bisa08g1315 1445 PANTHER MYOSIN 69 1376 - -
Bisa08g1315 1445 Pfam DIL domain 1264 1367 IPR002710 -
Bisa08g1315 1445 ProSiteProfiles Myosin motor domain profile. 70 712 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 FunFam Myosin 2 289 404 - -
Bisa08g1315 1445 Pfam Myosin head (motor domain) 70 700 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 ProSiteProfiles IQ motif profile. 861 890 IPR000048 GO:0005515
Bisa08g1315 1445 ProSiteProfiles IQ motif profile. 813 842 IPR000048 GO:0005515
Bisa08g1315 1445 ProSiteProfiles IQ motif profile. 838 864 IPR000048 GO:0005515
Bisa08g1315 1445 SMART DIL_2 1263 1370 IPR002710 -
Bisa08g1315 1445 PRINTS Myosin heavy chain signature 69 88 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 PRINTS Myosin heavy chain signature 459 487 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 PRINTS Myosin heavy chain signature 126 151 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 PRINTS Myosin heavy chain signature 173 200 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 PRINTS Myosin heavy chain signature 406 434 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 Gene3D - 840 888 - -
Bisa08g1315 1445 Gene3D - 715 754 - -
Bisa08g1315 1445 Gene3D - 789 839 - -
Bisa08g1315 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 887 IPR027417 -
Bisa08g1315 1445 Gene3D Myosin VI head, motor domain, U50 subdomain 289 578 - -
Bisa08g1315 1445 Gene3D Kinesin motor domain 70 639 IPR036961 -
Bisa08g1315 1445 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 26 75 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 Pfam Myosin N-terminal SH3-like domain 27 66 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 SMART iq_5 714 736 IPR000048 GO:0005515
Bisa08g1315 1445 SMART iq_5 789 811 IPR000048 GO:0005515
Bisa08g1315 1445 SMART iq_5 860 882 IPR000048 GO:0005515
Bisa08g1315 1445 SMART iq_5 837 859 IPR000048 GO:0005515
Bisa08g1315 1445 SMART iq_5 812 834 IPR000048 GO:0005515
Bisa08g1315 1445 SMART MYSc_2a 43 713 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bisa08g1315 1445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 752 IPR027417 -
Bisa08g1315 1445 Pfam IQ calmodulin-binding motif 839 859 IPR000048 GO:0005515
Bisa08g1315 1445 Pfam IQ calmodulin-binding motif 793 810 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1315 Bisa-ChrBisa08 26948008 26966119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1315 70 1445 Myosins gene family AT5G20490 72.498 0.0 2127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1315 08 26948008 26966119 Bisa08g1315 08 26948008 26966119 ECH