Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1309 ATGGATAGGATTACACACAATAAATTCTCCAACTGGTTGTTCCCAAAATCATTACCATCTCCAAATTCCCCCAAAGTTACATTAATGGGGGATGTCCTAGGCCCCTTCACACTCTCACCTCCTCCTCCTACCTCTTCTCCTTCTTCACCCTCAAATTCCAGCATGCCCATGCTGTACTATGGCCTCGTAGTGGTGGGAACTGCCGCCATAGTCTTGGCCATGTACAACCTAATCGTCATCCGACGGTGCCGCCGCCGCCACGCGCAGTCCCCGCCGCAGCCGCACGACCGGAATGTTGAAGTGTTGATCGCGTCGGGTGGTAGTAATTGGAGTTTGGAGAGCTCGAACAGGAACTTGCTTGCGAGCTTTAAGTACAAGAAGGAAGCAGAGGAAGTGGAGAAGGAAGGAGGAGGAGAGGATTATGAGTGCCCTGTTTGCTTATCGGTGTTTGAAGAAGGAGAAGAAGTGAGGAAGATGCCTCTGTGTAAGCATTCCTTTCATGCGGTTTGTATTGATATGTGGCTTCACTCTCACTCCGATTGCCCAATTTGTCGAACGCCTGTCGGACGCTTTTCTCGGAGTTCGCCGGCCGAACAGAGTTCGCGAGAGTCCGGCGTCTCAGTTTGA 627 0.5152 MDRITHNKFSNWLFPKSLPSPNSPKVTLMGDVLGPFTLSPPPPTSSPSSPSNSSMPMLYYGLVVVGTAAIVLAMYNLIVIRRCRRRHAQSPPQPHDRNVEVLIASGGSNWSLESSNRNLLASFKYKKEAEEVEKEGGGEDYECPVCLSVFEEGEEVRKMPLCKHSFHAVCIDMWLHSHSDCPICRTPVGRFSRSSPAEQSSRESGVSV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1309 208 CDD RING-H2_EL5-like 142 185 - -
Bisa08g1309 208 Pfam Ring finger domain 142 185 IPR001841 -
Bisa08g1309 208 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 49 188 IPR044675 -
Bisa08g1309 208 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Bisa08g1309 208 SUPERFAMILY RING/U-box 133 190 - -
Bisa08g1309 208 FunFam RING-H2 finger protein ATL1 99 190 - -
Bisa08g1309 208 SMART ring_2 143 184 IPR001841 -
Bisa08g1309 208 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 115 193 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1309 Bisa-ChrBisa08 26807241 26807867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1309 48 188 C3H Transcription Factor Family AT1G04360 32.450 6.01e-20 84.7