Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1302 ATGCATTTCAGGTGGACTCTAATCGCAGGACGATTGCCAGGACGAACAGATAATGAAATCAAGAACTTCTGGAACAACAATCTGAGCAAAAGGGTAAAACAGAAGGACAACCAAAACAAACCCTCAAACCCAACAAGAAACAGAGATCCAAGCACTTCAATGAATGAAAAAATCTCTTTGTTGGCCACTGATTCTGGAAGTGTTTCTTCCCAATCCCATCCTGTGGTTCGAGCACAAGGAATGAGATGCATCAAGAAGATTATAATGCCAGAGATGCGGGAACCCAATGCAGCAGATTGGGAAACCCAGATTGGTAGTGGTACTACTTCTGCATCTTCCACAGTACAAGACGACAACGAGCATTTGCGTTTCTTTTCCCACGGTTTCCTTGAAAACTTTGATATTGACGACTTACTCATACCAGAGGTGAATGAATCAAAATATTTTGAGAATCTTCAAGTGAGTCAGGAGGGAATTCAAAATGGGTTTACTGCTGATGTTGGAGCTGTAGCCAACGACGTTGTCATCAGTGCAGTCAACGACGATTCCGAAAATCCTCAGAATTGGATGGTTCACGACTTCTTTGAACCGAATCATGATGAAGACGTAGATTTCTCTTTGCTAAATTTAGATCATGTGTGA 642 0.419 MHFRWTLIAGRLPGRTDNEIKNFWNNNLSKRVKQKDNQNKPSNPTRNRDPSTSMNEKISLLATDSGSVSSQSHPVVRAQGMRCIKKIIMPEMREPNAADWETQIGSGTTSASSTVQDDNEHLRFFSHGFLENFDIDDLLIPEVNESKYFENLQVSQEGIQNGFTADVGAVANDVVISAVNDDSENPQNWMVHDFFEPNHDEDVDFSLLNLDHV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1302 213 CDD SANT 4 28 IPR001005 -
Bisa08g1302 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 32 IPR017930 -
Bisa08g1302 213 Gene3D - 2 59 - -
Bisa08g1302 213 ProSiteProfiles Myb-like domain profile. 1 28 IPR001005 -
Bisa08g1302 213 MobiDBLite consensus disorder prediction 29 53 - -
Bisa08g1302 213 Pfam Myb-like DNA-binding domain 4 28 IPR001005 -
Bisa08g1302 213 SUPERFAMILY Homeodomain-like 3 36 IPR009057 -
Bisa08g1302 213 PANTHER MYB DOMAIN PROTEIN 55 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1302 Bisa-ChrBisa08 26677296 26678719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1302 4 43 MYB Transcription Factor Family AT5G14750 60.000 1.49e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa08g1302 Myb_DNA-binding 5.3e-06 CL0123