Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1300 ATGGGAAGAAGCCCTTGCTGCTCCAAGGAGGGCTTGAACAGAGGCGCTTGGACTGCTCTTGAAGATAAAATTCTCAGAGACTACATCACTGTCCATGGGGAAGGCCGATGGCGGAACCTCCCCAAAAGAGCAGGTTTGAAAAGATGTGGAAAAAGTTGCAGACTCCGATGGCTGAATTATCTCAGGCCAGATATCAAGAGAGGCAATATAACCCCAGATGAAGAAGAGCTTATCATCAGACTTCATAAGCTCTTGGGGAACAGATGGTCTCTGATAGCAGGGAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAACTACTGGAACACCAATTTAGGGAAGAAAGTTAAAGATAATCATCATCGACAAAATGGTGTCGCTTCGTCTCGGAGACACTCTGTTCAACCCAATAATGGTACCGCCAATCCCATAACCACTTCACCTGCTTCACCTAATTCTAAGCTCAAAGATTCCCTCTCTCACGTGGTTCGTACAAAGGCAACCAAGTGCTCTAAGAGCAACGCCGCCGAGACAAATGTGGCTAATAATCTTCACTCTTTTACTTCCTTTCTTGAATCCAATGAGGAATGGCTGGGAGAATAA 603 0.4577 MGRSPCCSKEGLNRGAWTALEDKILRDYITVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDNHHRQNGVASSRRHSVQPNNGTANPITTSPASPNSKLKDSLSHVVRTKATKCSKSNAAETNVANNLHSFTSFLESNEEWLGE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1300 200 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 175 - -
Bisa08g1300 200 CDD SANT 16 61 IPR001005 -
Bisa08g1300 200 Gene3D - 71 139 - -
Bisa08g1300 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa08g1300 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa08g1300 200 Gene3D - 14 66 - -
Bisa08g1300 200 FunFam MYB-related transcription factor 13 66 - -
Bisa08g1300 200 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bisa08g1300 200 SMART sant 13 63 IPR001005 -
Bisa08g1300 200 SMART sant 66 114 IPR001005 -
Bisa08g1300 200 MobiDBLite consensus disorder prediction 128 159 - -
Bisa08g1300 200 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa08g1300 200 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa08g1300 200 CDD SANT 71 112 IPR001005 -
Bisa08g1300 200 FunFam Transcription factor TT2 70 140 - -
Bisa08g1300 200 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa08g1300 200 MobiDBLite consensus disorder prediction 114 159 - -
Bisa08g1300 200 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1300 Bisa-ChrBisa08 26581953 26583129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1300 1 143 MYB Transcription Factor Family AT2G47460 62.937 2.97e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g1300 Myb_DNA-binding 7.8e-13 CL0123