Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1296 ATGAACGCAGGAAGAAACAGGTTCCCTTTTACTCCATTACAGTGGCAAGAGCTTGAACATCAAGCTCTTATCTTCAAGTACATGGCTTCAGGCATCCCCATTCCCCCTGATCTTCTCTTCCCTACCAAAACCACCTCTCTGGACTCTCCTTTTTCCTCAAGGCTCTTCTCTCACCAACTTCAACACTTTGGGTGGAACTATTTGCAGATGGGTTTGGGGAGAAAGATAGACGCAGAACCAGGGAGGTGCAGGAGAACAGACGGGAAGAAATGGAGATGCTCAAAAGAGGCGTACCCAAATTCTAAGTACTGTGAAAGACACATGCACAGAGGAAACAACCGTTTAAGAAAACAGACGACGACGTCAACATCAACACAACCACAGACGAACACAAATTCCTCAACCTTCACAAAAAGCAACACCCCTGCTCTGTCCCTTACCACCCATTCTTCTCTCTCATCTGTCTCCGACTCCACCCACCATCCCTCCTTCCTCTACCATCATCCTCGCCAACCTTCAAGGCCTCCTGGGATTAGCTTCTCATTTCAACATGATACTGCTTCTCACTTGAGTAACAGGTATGTTTATGATGGACTAAGGGAGGAGGTGGACGAGCATGCTTTCTTCACAGAGCCATCTGGGACCATGAGAAGCTTCTCTGCTTCATCCATGGAAGATTCTTCCTGGCATTTCACTCCACTGACTATGAACTCCTCGTCTTCTTCCTCGAAACAGAGGAGCTGCTCTGGTTTATCCAACGACTACTCCAATTACTTGCAGCTTCAGAACCACAATCTCAGTGACAGCAGAAATATGCAAGAACAAAATTGCTATATGCTGGGTCTTGAAAAACCAGAAGAACCTCAGAATCAAAAGACAGTTCATCGCTTCCTCGATGAATGCCCCCACAAAAGCAGAACCTCTTGGCTTGATTTGGAGGACAAATCATCCACAACCCAACTTTCAATTTCCATTCCCACCCCTGATCATCACCATTTTCCCCGAGAGTTCAGAGTTCAGACTTGTTGGGATTCTGTCAGGTGTTCCACTTCATGTGGTTTAAATGCAGATGAAATGGATGCGTCTCCATGA 1092 0.4634 MNAGRNRFPFTPLQWQELEHQALIFKYMASGIPIPPDLLFPTKTTSLDSPFSSRLFSHQLQHFGWNYLQMGLGRKIDAEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKQTTTSTSTQPQTNTNSSTFTKSNTPALSLTTHSSLSSVSDSTHHPSFLYHHPRQPSRPPGISFSFQHDTASHLSNRYVYDGLREEVDEHAFFTEPSGTMRSFSASSMEDSSWHFTPLTMNSSSSSSKQRSCSGLSNDYSNYLQLQNHNLSDSRNMQEQNCYMLGLEKPEEPQNQKTVHRFLDECPHKSRTSWLDLEDKSSTTQLSISIPTPDHHHFPREFRVQTCWDSVRCSTSCGLNADEMDASP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1296 363 MobiDBLite consensus disorder prediction 106 183 - -
Bisa08g1296 363 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa08g1296 363 PANTHER GROWTH-REGULATING FACTOR 5 8 329 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bisa08g1296 363 Pfam WRC 78 118 IPR014977 -
Bisa08g1296 363 MobiDBLite consensus disorder prediction 115 161 - -
Bisa08g1296 363 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bisa08g1296 363 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Bisa08g1296 363 Pfam QLQ 9 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1296 Bisa-ChrBisa08 26483500 26485039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1296 7 142 GRF Transcription Factor Family AT3G13960 60.294 1.18e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bisa08g1296 WRC 5.5e-19 No_clan