Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa08g1238 | ATGGAACGCTACGACAATGATCGTCTTGGTTTTGGGAAGATGGGATACGGGTGCAAGCATTATAGGAGAAGATGCAAGATTCGGGCTCCCTGCTGCAACGAGATATACTCCTGCCGTCACTGTCATAACGAAGCAACGAGCATGTTGAGGAATCCCTTTGATCGGCACGAGCTCGTCCGCGAAGATGTTAAACAAGTTGTTTGTTCAGTTTGTGATACAGAGCAACCGGTTTCTCAAGTTTGCACAAACTGTGGCGTCAAAATGGGAGAATATTTCTGCGACATCTGCAAATTCTTCGATGATGATACAGAGAAACAGCAGTTTCATTGTGATGATTGTGGGATCTGCAGAATTGGTGGTCGTGATAACTTTTTCCACTGCGATAAATGCGGGTCTTGCTATTCTCTTGGTCTACTTGATAATCATTTATGTGTGGAGGACTCAATGAGACACCACTGTCCTATCTGTTATGAGTACCTTTTTGACTCAGTGAAAGATACTACCGTCATGAAATGTGGTCACACAATGCATTGTGAATGTTTCCACGAGATGATAAAGCGTGACAAGTACTGTTGCCCCATATGCTCAAAGTCAGTGATCGACATGTCTAGCATCTGGAAGATGATTGACGATGAGATTGAAGCAACTCTCATGCCTGATGATTATCGGTACAAGAAGGTTTGGATACTATGTAATGACTGCAATGACACAACTGAAGTTTACTTCAACATTATTGGGCATAAATGTGGCCACTGCAGCTCATATAATACTCGTGAAATCGCTCCTCCAGTTCTTCCTCAATGA | 804 | 0.4303 | MERYDNDRLGFGKMGYGCKHYRRRCKIRAPCCNEIYSCRHCHNEATSMLRNPFDRHELVREDVKQVVCSVCDTEQPVSQVCTNCGVKMGEYFCDICKFFDDDTEKQQFHCDDCGICRIGGRDNFFHCDKCGSCYSLGLLDNHLCVEDSMRHHCPICYEYLFDSVKDTTVMKCGHTMHCECFHEMIKRDKYCCPICSKSVIDMSSIWKMIDDEIEATLMPDDYRYKKVWILCNDCNDTTEVYFNIIGHKCGHCSSYNTREIAPPVLPQ | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa08g1238 | 267 | Pfam | CHY zinc finger | 18 | 98 | IPR008913 | GO:0008270 | |
Bisa08g1238 | 267 | SMART | ring_2 | 153 | 195 | IPR001841 | - | |
Bisa08g1238 | 267 | ProSiteProfiles | Zinc finger RING-type profile. | 153 | 196 | IPR001841 | - | |
Bisa08g1238 | 267 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 141 | 225 | IPR013083 | - | |
Bisa08g1238 | 267 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 13 | 264 | - | - | |
Bisa08g1238 | 267 | SUPERFAMILY | RING/U-box | 152 | 203 | - | - | |
Bisa08g1238 | 267 | Pfam | Zinc-ribbon | 200 | 258 | IPR039512 | - | |
Bisa08g1238 | 267 | SUPERFAMILY | CHY zinc finger-like | 16 | 87 | IPR037274 | GO:0008270 | |
Bisa08g1238 | 267 | ProSiteProfiles | Zinc finger CHY-type profile. | 11 | 86 | IPR008913 | GO:0008270 | |
Bisa08g1238 | 267 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 88 | 152 | IPR017921 | - | |
Bisa08g1238 | 267 | Pfam | Zinc finger, C3HC4 type (RING finger) | 153 | 195 | IPR018957 | GO:0046872 | |
Bisa08g1238 | 267 | SUPERFAMILY | Zinc hairpin stack | 89 | 146 | IPR037275 | - | |
Bisa08g1238 | 267 | Gene3D | - | 226 | 262 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa08g1238 | Bisa-ChrBisa08 | 24933119 | 24937606 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa08g1238 | 13 | 266 | C2H2 Transcription Factor Family | AT3G18290 | 40.385 | 1.69e-55 | 190 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa08g1238 | 08 | 24933119 | 24937606 | Bisa08g1238 | 08 | 24933119 | 24937606 | ECH |