Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1232 ATGTCCTCCTCTAAAACCCCAGAAAACCAACCCCGCAAGATCATGGGCTTGTCCCTCCTTCAAAAAAACCCATCATCATCATCCCCTTCTTGTCGAGAAAGAAGAGGAAGAAGAAAGCAAGGAGAAGCAGGGAGGTTTCTTGGGGTGAGAAGAAGGCCATGGGGAAGATATGCTGCAGAAATCAGAGACCCCGCAACTAAAGAAAGACACTGGCTTGGCACTTTTGACACTGCCCATGAAGCTGCTCTTGCTTATGACAGAGCTGCTCTCTCCATCAAAGGCTCCCAAGCCAGGACCAACTTCATTTACAACACCACTTTTCACTTTGACCTTCATCTTCAACCTCTGCTCTTTAAACCCACCAATCACAACACCACTCCACCTCACGACTCTCAATCTGAAAGTCCCCATGTGCAGAACAAACCTGCTTGTGGCTCTTCAAAATCTGAGGTTGCTGATGATGATGGTGATGATAACCTGTTCTTCTTCTCCGATCGTAACTCCAACTCTGGATACTTGGAATGCATTGTTCCTGATATCTGTTTCAGACCTTCTTCTAGTGCTACTAACAATAACGGTACTAACTCAATCTCCAGAAAGAGCAATGAAAATGGCTTTGACATTGTCAGTTCTCAAGGAGCTTTGAACATGCCAACATCAATGGCTTCTAGCTTTGGAGATTGTTCTTATTTAAATGAGTTTGGCCAAGAACAGTCATGGGATTGGGATTACAGTGAGCTTTCTGCTATATTTAACAATCATCCATTGAGGATCGAAGATACAGAGAGTTCAAGCCTTGAGATGATGACTCAGGATGCTGCTTTTTCAATGAATTTTTCTCCGTCAATTCCTCCTTTTGGAGATGTTGATTTGGGATACTCACTTTTCTGA 891 0.4366 MSSSKTPENQPRKIMGLSLLQKNPSSSSPSCRERRGRRKQGEAGRFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAHEAALAYDRAALSIKGSQARTNFIYNTTFHFDLHLQPLLFKPTNHNTTPPHDSQSESPHVQNKPACGSSKSEVADDDGDDNLFFFSDRNSNSGYLECIVPDICFRPSSSATNNNGTNSISRKSNENGFDIVSSQGALNMPTSMASSFGDCSYLNEFGQEQSWDWDYSELSAIFNNHPLRIEDTESSSLEMMTQDAAFSMNFSPSIPPFGDVDLGYSLF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1232 296 MobiDBLite consensus disorder prediction 31 46 - -
Bisa08g1232 296 MobiDBLite consensus disorder prediction 1 47 - -
Bisa08g1232 296 Pfam AP2 domain 48 94 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 27 190 - -
Bisa08g1232 296 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 MobiDBLite consensus disorder prediction 120 152 - -
Bisa08g1232 296 FunFam Ethylene-responsive transcription factor 2 45 103 - -
Bisa08g1232 296 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Bisa08g1232 296 MobiDBLite consensus disorder prediction 120 146 - -
Bisa08g1232 296 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bisa08g1232 296 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1232 Bisa-ChrBisa08 24813582 24814472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1232 1 189 AP2-EREBP Transcription Factor Family AT5G18560 44.488 3.60e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa08g1232 AP2 1.5e-11 CL0081