Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1228 ATGGCCTTGTTCTATCGTTATCGTAAAGCCATGCTTTATGCGCATCGAACTGCAACGATCTCACCCATCCAAAAACTATGCTTCATCGCACATTGGAATTCATCGTACAGCACAAGCACAAGCACTTCTGATTCACCGTCTTTTACGGTGAACTACCTCATAATCAATTTGCAGTTGTCACAAGAAATCGCTTCCCATGTCTCCAAGCATGTTCGCTTGCAGAAACCAGAGAGGTCAGACTCGGTGCTTGCGTTGTTTAGAAATTACGGCTTCTCAAACTCTCAGATCGCCGGCATCATCAAGGACCAGCCACTTCTGCTTGTGGCCGATGCTCACAAAACCATTCTTCCCAAGTTACAGTTTCTTGAGTCCAAGGGTGCTTCGAGGTCCGAAGTTGTCCACATTTCGACTTCGTGGCCGAGATTCTTACGCCGAAGCTTGGAGAATTGTGTAATCCCTTCTTATGATTCTTTAAAGAGATTTCTTCTGTCTGATGAACGAACAATTGAATACATGAAGCATCGTGCGTATTTAATTACTGAGAATCGGATGGCTGGGAATGTTACTTTGCTGCTTGATAATGGAGTGCCTGAGTCAAAAGTTGCGTTACTATTCAAAAGGCCTCTCTCTATCAAATCACATCCAGATTTCTTTAAAAAAACAGTGGAGGAAGTGAAGGAATTGGGATTCAACCCTTCGACGGCAGATTTTGTGATAGCATTGCGGATCAAAATTGTAGTGAGAGAGTCTGCGTGGAGAAAGAAGATTGATTTGTATAAGAGATGGGGTTGGTCTGAAGATACAACTGCTTCAGCATTTTTAAGGCGTCCATGGTGTATGTCGATATCTGAGGGGAAAATTGAGGAAATCATGGATTTTTTTGTTACCCATTTGGGCTGGGATTCTATGGAGCTTGCAAATAATCCACATCTGCTTTCATTCAGTCTGCAGAAGAGGATTATGCCAAGAGCTTCGGTTATACAGTTTCTTCAATCAAAGGAATTGATTAGTAAGAATTATAGACATGTTAGAGCATTTCTTATATCCGAGAAGTCATTCCGGAATAATTTTGTGAATTGCTTTAAGGAAAAAGCTCCAGAGCTTTTGAAGCTGTATGAAGAAAAACAGAATATTTCAAATAAATGA 1146 0.4119 MALFYRYRKAMLYAHRTATISPIQKLCFIAHWNSSYSTSTSTSDSPSFTVNYLIINLQLSQEIASHVSKHVRLQKPERSDSVLALFRNYGFSNSQIAGIIKDQPLLLVADAHKTILPKLQFLESKGASRSEVVHISTSWPRFLRRSLENCVIPSYDSLKRFLLSDERTIEYMKHRAYLITENRMAGNVTLLLDNGVPESKVALLFKRPLSIKSHPDFFKKTVEEVKELGFNPSTADFVIALRIKIVVRESAWRKKIDLYKRWGWSEDTTASAFLRRPWCMSISEGKIEEIMDFFVTHLGWDSMELANNPHLLSFSLQKRIMPRASVIQFLQSKELISKNYRHVRAFLISEKSFRNNFVNCFKEKAPELLKLYEEKQNISNK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1228 381 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 FunFam Mitochondrial transcription termination factor-like 147 365 - -
Bisa08g1228 381 Pfam mTERF 177 351 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 Pfam mTERF 83 231 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 PANTHER CGI-12 PROTEIN-RELATED 45 362 IPR003690 GO:0003690|GO:0006355
Bisa08g1228 381 Gene3D Transcription termination factor 3, mitochondrial 178 370 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1228 Bisa-ChrBisa08 24724370 24725515 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa08g1228 mTERF 2.3e-15 No_clan