Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1225 ATGGCCTTGTTCCATCGTTATCGCAAAGCCATGCTTTATGTGTATCGAACTGCAACGATCTCACCCATCCAAAAACTATGCTTCATCGCACATTGCAATTCATCGTACAGCACAAGCACAAGCACTTCTGATTCACCGTCTTTTACGGTGAACTACCTCATAAACAATTTGCAGTTGTCACAAGAAATCGCTTCCCATGTCTCCAAGCATGTTCGCTTGCAGAAACCAGAGAGGTCAGACTCGGTGATTGCCTTGTTTAGAAATTACGGCTTCTCAAACTCTCAGATCGCCGGCATCATCAAGGACCAGCCACTTCTGCTTGTGGCCGATGCTCACAAAACCATTCTTCCCAAGTTACAGTTTCTTGAGTCCAAGGGTGCTTCGAGGTCCGAAGTTGTCCACATTGCCACTTCGTGGCCGAGATTCTTACGCCGAAGCTTGGAGAATTGTGTAATCCCTTCTTATGATTCTTTAAAGACATTTCTTCTGTCTGATGAACAAACAATTGAATACATAAAGCATCGTGCGTATTTGATTACTGAGAATCGGATAGCTGGGAATGTTACTTTGTTGCTTGATAATGGAGTGCCTGAGTCAAAAGTTGCGTTACTATTCAAAAGGCCTCTCTCAATCAAATCACATCCAGATTTCTTTAAAAAAGTAGTGGAGGAAGTGAAGGAATTGGGATTCAACCCTTCGAAGGCAGATTTTGTGATAGCATTGCGTGTCAAAATTGTAGTGAGCGAATCTGCGTGGAGAAAGAAGATTGATTTGTATAAGAGATGGGGTTGGTCTGAAGATACAACTGCTTCAGCATTTTTAAGGCGTCCATGGTGTATGTCGATATCTGAGGGGAAAATTGAGGAAATCATGGAATTTTTTATTACCCATTTGGGCTGGGATTCTATGGAGCTTGCAAAACATCCACGTCTACTCTCATTCAGTTTGCAGAAGAGGATTATGCCAAGAGCTTCGGTTATACAGTTTCTCCAATCAAAGGAATTGATTAGTAAGAATTATAGACATGTTAGAGCATTTGTCATGTCCGAAAAGTTATTCCGGAATAATTTTGTGAATTGCTTTAAGGAAAAAGCTCCAGAGCTTTTGAAGCTGTATGAAGAAAAACAGAATATTTCAAATAGATGGGGTTGGTCTGAAGATACAACTGCTTCAGCATTTTTAAGGCGTCCATGGTGTATGTCGATATCTGAGGGCAAAATTGATGAAATCATGGAATTTTTTGTCACACATTTGGGCTGGGATTCTATGGAGGTTGCAAAACATCCAAAACTACTTTCATTCAATTTGCAGAAGAGGATTATGCCAAGAGCTTCGGTTATACAGTTTCTCCAATCAAAGGAATTGATTAGTAAGAATTATAGACATGTTAGAGCATTTCTTATATCCGAGAAGTCATTCCGGAATAATTTTGTGAATTGCTTTAAGGAAAAAGCTCCAGAGCTTTTGAAGCTGTATGAAGAAAAACAGAATATTGCAAATAAATGA 1506 0.3984 MALFHRYRKAMLYVYRTATISPIQKLCFIAHCNSSYSTSTSTSDSPSFTVNYLINNLQLSQEIASHVSKHVRLQKPERSDSVIALFRNYGFSNSQIAGIIKDQPLLLVADAHKTILPKLQFLESKGASRSEVVHIATSWPRFLRRSLENCVIPSYDSLKTFLLSDEQTIEYIKHRAYLITENRIAGNVTLLLDNGVPESKVALLFKRPLSIKSHPDFFKKVVEEVKELGFNPSKADFVIALRVKIVVSESAWRKKIDLYKRWGWSEDTTASAFLRRPWCMSISEGKIEEIMEFFITHLGWDSMELAKHPRLLSFSLQKRIMPRASVIQFLQSKELISKNYRHVRAFVMSEKLFRNNFVNCFKEKAPELLKLYEEKQNISNRWGWSEDTTASAFLRRPWCMSISEGKIDEIMEFFVTHLGWDSMEVAKHPKLLSFNLQKRIMPRASVIQFLQSKELISKNYRHVRAFLISEKSFRNNFVNCFKEKAPELLKLYEEKQNIANK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1225 501 FunFam Mitochondrial transcription termination factor-like 147 365 - -
Bisa08g1225 501 Gene3D Transcription termination factor 3, mitochondrial 366 490 IPR038538 -
Bisa08g1225 501 Gene3D Transcription termination factor 3, mitochondrial 151 365 IPR038538 -
Bisa08g1225 501 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 390 421 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 SMART mt_12 422 456 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 PANTHER CGI-12 PROTEIN-RELATED 373 482 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 Pfam mTERF 363 471 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 Pfam mTERF 84 231 IPR003690 GO:0003690|GO:0006355
Bisa08g1225 501 Pfam mTERF 177 353 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1225 Bisa-ChrBisa08 24646500 24648005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa08g1225 mTERF 1.8e-16 No_clan