Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1221 ATGGAATCGTCTTCTCGTCGGATAACGAGACGGCGGAGACGGGAGCAGGAGAAGCTGGTGAGGGAGGCAATTTGGCCTTCAATTCGGGGGCATTCTTGTCCGATATGTTTCAGAGACCTCGAAGATTATTACAAAGAAGCTGCAGTTTTGACCGTGTGTATGCACGCTTACTGCATCGGATGCATTCGCAAGTGGAGTAACTTCAAAAGGAAGTGCCCTCTTTGTAATGGAAACTTCAATTCTTGGTTCTGCAAGCTTAGTCTCTCCTCTAGAGAGTTTCTGAAGGAGGTCTTGCCCTTTGAGGGTTCGACCGGAAATTCTCGTCAAGAGATTTGTACAAGCCATTTAGATGCTCGCAGAACAAGAGCTGCTTTAGATGAGAGGCAAACTAGGGCGTTGCCATGGCGAAGATCATTTGGGCGGCCTGGACTTGCTAGTCCAGATGTTATTGCTCAAGGGAAAATTGAATGGCGTGCTAGCATATACAACCAGCATCTGCAAGCAGTTCCTTCAACCTTAAGCTGTCCTGAGCAGATTAAATTGAGAAATAGTGCTGTAAAAGAGAAAATTCTACAAAAGATTGAGCCATGGATATGGAGGGAGTTACAGGCTGTGCTGGGTGACCCAGATCCAACTGTCATTGTTCATGTGGCTACCTCACAGTACTTTGCATGGCTGGAAGATAAAGCTAAATTACCCTCTGGACAGTTTGATGTGGAAGAGAAGTTTACATCACCTCTCCGTCCTTTCCTTCTGGATAAAGCCAGTATCTTTTGGCATGAACTGAGATGTTTTGCAGAGAGTAGGTACAATCTTGAAACATATGATGCAGTGGTTGAATATAGATATCCATAG 855 0.4515 MESSSRRITRRRRREQEKLVREAIWPSIRGHSCPICFRDLEDYYKEAAVLTVCMHAYCIGCIRKWSNFKRKCPLCNGNFNSWFCKLSLSSREFLKEVLPFEGSTGNSRQEICTSHLDARRTRAALDERQTRALPWRRSFGRPGLASPDVIAQGKIEWRASIYNQHLQAVPSTLSCPEQIKLRNSAVKEKILQKIEPWIWRELQAVLGDPDPTVIVHVATSQYFAWLEDKAKLPSGQFDVEEKFTSPLRPFLLDKASIFWHELRCFAESRYNLETYDAVVEYRYP 284
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1221 284 SMART ring_2 33 75 IPR001841 -
Bisa08g1221 284 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Bisa08g1221 284 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Bisa08g1221 284 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 139 IPR013083 -
Bisa08g1221 284 Pfam Ring finger domain 32 76 IPR001841 -
Bisa08g1221 284 SUPERFAMILY RING/U-box 32 81 - -
Bisa08g1221 284 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 2 284 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa08g1221 Bisa-ChrBisa08 24572766 24575213 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1221 18 262 C3H Transcription Factor Family AT2G39100 47.082 1.48e-69 214