Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1218 ATGGAATCGTCTTCTCGTCGGATAACGAGACGGCGGAGACGGGAGCAGGAGAAGCTGGTGAGGGAGGCAATTTGGCCTTCAATTCGGGGGCATTCTTGTCCGATATGTTTCAGAGACCTCGAAGATTATTACAAAGAAGCTGCAGTTTTGACCGTGTGTATGCACGCTTACTGCATCGGATGCATTCGCAAGTGGAGTAACTTCAAAAGGAAGTGCCCTCTTTGTAATGGAAACTTCAATTCTTGGTTCTGCAAGCTTAGTCTCTCCTCTAGAGAGTTTCTGAAGGAGGTCTTGCCCTTTGAGGGTTCGACCGGAAATTCTCGTCAAGAGATTTGTACAAGCCATTTAGATGCTCGCAGAATTCTTCGTAGAACAAGAGCTGCTTTAGATGAGAGGCAAACTAGGGCGTTGCCATGGCGAAGATCATTTGGGCGGCCTGGACTTGCTAGTCCAGATGTTATTGCTCAAGGGAAAATTGAATGGCGTGCTAGCATATACAACCAGCATCTGCAAGCAGTTCCTTCAACCTTAAGCTGTCCTGAGCAGATTAAATTGAGAAATAGTGCTGTAAAAGAGAAAATTCTACAAAAGATTGAGCCATGGATATGGAGGGAGTTACAGGCTGTGCTGGGTGACCCAGATCCAACTGTCATTGTTCATGTGGCTACCTCACAGTACTTTGCATGGCTGGAAGATAAAGCTAAATTACCCTCTGGACAGTTTGATGTGGAAGAGAAGTTTACATCACCTCTCCGTCCTTTCCTTCTGGATAAAGCCAGTATCTTTTGGCATGAACTGAGATGTTTTGCAGAGAGTAGGTACAATCTTGAAACATATGATGCAGTGGTTGAATATAGATATCCATAG 867 0.4498 MESSSRRITRRRRREQEKLVREAIWPSIRGHSCPICFRDLEDYYKEAAVLTVCMHAYCIGCIRKWSNFKRKCPLCNGNFNSWFCKLSLSSREFLKEVLPFEGSTGNSRQEICTSHLDARRILRRTRAALDERQTRALPWRRSFGRPGLASPDVIAQGKIEWRASIYNQHLQAVPSTLSCPEQIKLRNSAVKEKILQKIEPWIWRELQAVLGDPDPTVIVHVATSQYFAWLEDKAKLPSGQFDVEEKFTSPLRPFLLDKASIFWHELRCFAESRYNLETYDAVVEYRYP 288
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1218 288 SMART ring_2 33 75 IPR001841 -
Bisa08g1218 288 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Bisa08g1218 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 139 IPR013083 -
Bisa08g1218 288 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Bisa08g1218 288 SUPERFAMILY RING/U-box 32 81 - -
Bisa08g1218 288 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 2 288 - -
Bisa08g1218 288 Pfam Ring finger domain 32 76 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa08g1218 Bisa-ChrBisa08 24536036 24538483 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1218 18 266 C3H Transcription Factor Family AT2G39100 48.638 5.67e-73 223