Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1212 ATGGGTGGGTGTTTTCCTTGCTTTGGATCATCCAACAAGGAGGACAGTAGGGTGAAGGAAGTGGTCAAGAAGGATTCTTTAAAAGAAGGTTCAGTTGCTCAGTCTCATCACGTCAATAGGACTACCTCAGATAAATCAAAATCGAGAAGTGGCTCTGATTCGAAGAAGGAACCACCAGCTCCAAAGGATGGACCAACTGCTCACATTGCTGCACAAACTTTTACATTTCGAGAGCTTGCTGCTGCTACAAGGAACTTTAAGCCAGAATGTTTATTAGGCGAGGGAGGTTTTGGACGTGTTTATAAAGGTCGCCTTGAAGGAACAGGGCAAGTAGTTGCTGTTAAACAGCTTGATCGCAATGGCCTCCAAGGAAATCGTGAGTTTTTGGTGGAGGTTCTCATGCTTAGCCTTTTACATCACCCCAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGGGATCAGCGACTGCTTGTTTATGAATTTCTGCCACTGGGATCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCCTTGGACTGGAACACAAGGATGAAAATAGCAGCTGGAGCAGCGAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCCCCTGTAATTTATAGAGATTTAAAATCATCAAACATCCTCCTAGATGAGGGTTATCATCCCAAATTATCAGATTTTGGGTTAGCAAAACTTGGTCCCGTTGGTGATAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAGTATGCTATGACTGGCCAGCTAACTCTGAAGTCTGATGTTTACAGCTTTGGAGTTGTCTTCCTAGAACTTATCACTGGGAGAAAGGCTATTGATAATACACGTGCACCTGGAGAGCATAATCTCGTTGCATGGGCACGACCTCTTTTCAAAGACCGTAGGAAGTTCCCCAAAATGGCTGATCCTCTACTTCAAGGTCGTTATCCAATACGAGGACTCTACCAAGCACTTGCAGTTGCAGCAATGTGTTTGCAGGAACAAGCTGCTACGAGACCTCTTATTGGAGATGTTGTAACTGCTCTCACATACTTGGCCTCACAGACATATGACCCAAATGCAGGCAGTCAGACAAACAGAGTTGGTCCATCAACCCCTAGGAACAAGGAGGATCGAAAGAACATTGCAGATAGCTTGGACAGCCCTGACCGTGGCCGTCATCATGGCTCTCCTTCCACCCATAGAAACTCACCTGATTACAGGAAGAGAGATGGTAGGGATCCAAGTGCTGGAACAGACTTGGGTAGGATTGAAACTGGTGGTGGGTCAGGGAGAAGATGGGGATTGGATGATGTAGAAAGGCAGGAATCTCAGAGAGAGAGCCCTGTAAATACTGGAAGAGCTAGGGAAACTCCAAGGAATCGTGATCTAGACAGAGAACGTGCAGTTGCTGAAGCAAAAGTATGGGGTGAGAATTGGAGAGATAAAAAACGGGCTAATGCAATGGGTAGCTTTGATGCTACAAATGAGTGA 1527 0.4538 MGGCFPCFGSSNKEDSRVKEVVKKDSLKEGSVAQSHHVNRTTSDKSKSRSGSDSKKEPPAPKDGPTAHIAAQTFTFRELAAATRNFKPECLLGEGGFGRVYKGRLEGTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFLPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPIRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAGSQTNRVGPSTPRNKEDRKNIADSLDSPDRGRHHGSPSTHRNSPDYRKRDGRDPSAGTDLGRIETGGGSGRRWGLDDVERQESQRESPVNTGRARETPRNRDLDRERAVAEAKVWGENWRDKKRANAMGSFDATNE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1212 508 MobiDBLite consensus disorder prediction 383 429 - -
Bisa08g1212 508 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Bisa08g1212 508 Pfam Protein kinase domain 91 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1212 508 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1212 508 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Bisa08g1212 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bisa08g1212 508 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1212 508 MobiDBLite consensus disorder prediction 13 31 - -
Bisa08g1212 508 MobiDBLite consensus disorder prediction 40 62 - -
Bisa08g1212 508 MobiDBLite consensus disorder prediction 368 479 - -
Bisa08g1212 508 PANTHER OS07G0668900 PROTEIN 4 372 - -
Bisa08g1212 508 MobiDBLite consensus disorder prediction 368 382 - -
Bisa08g1212 508 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Bisa08g1212 508 MobiDBLite consensus disorder prediction 1 67 - -
Bisa08g1212 508 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Bisa08g1212 508 SUPERFAMILY Protein kinase-like (PK-like) 66 360 IPR011009 -
Bisa08g1212 508 CDD STKc_IRAK 92 361 - -
Bisa08g1212 508 Gene3D Transferase(Phosphotransferase) domain 1 163 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1212 Bisa-ChrBisa08 24382720 24392192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1212 4 365 Glycoside Hydrolase AT3G07070 65.323 1.42e-168 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bisa08g1212 Pkinase 9.7e-45 CL0016