Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1172 ATGCAGAACGAGGAGGGACAGATCACTGAACTTTACATTCCAAGAAAATGCTCTGCAACAAACAGACTGATCACCGCAAAGGATCATGCCTCTGTTCAGATGAACGTTGGGCATTTGGATGAGAACGGCATCTATAATGGCCACTTTTCCACATTTGCCCTATGTGGTTTCATTCGTGCACAGGGAGATGCTGATAGTGCATTAGATCGTTTGTGGCAGAAGAAGAAAGTTGAAGCCAAGCAACAGTAG 249 0.4498 MQNEEGQITELYIPRKCSATNRLITAKDHASVQMNVGHLDENGIYNGHFSTFALCGFIRAQGDADSALDRLWQKKKVEAKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1172 82 Gene3D - 1 82 IPR038579 -
Bisa08g1172 82 FunFam 40S ribosomal protein S21 1 81 - -
Bisa08g1172 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bisa08g1172 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bisa08g1172 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 80 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bisa08g1172 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1172 Bisa-ChrBisa08 22092186 22093274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1172 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 85.185 7.52e-53 157