Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1115 ATGAATTCGAGTTATGGCAAATCTAACCAACAGAAAGGTTCTTCCGTTTCCATGAACAACTTCAATTTTGAATTTGATCTTGGGATCGGATCAAATCGCCCTAGATCTCTCAACGATCAGAAAAACAATGCCTCATCAAATTCGTATTTTTCTTCTTCTTCCTCCTCTTCATTTTCGTCTGCGCAACCAAGACCCGCTTGGCAACCCAACAAGCCGTCATGGACTCACCAGCCGACGCCCAGTCTGGCGGCTCAGCCCGGCTTGCCTAGTGGCCCCACTTCGATGGTTGGGGATATCTCCGGCAAGAGCTGGGGATCGACTCAACCTTCGGCTTCGAATTCGAGTATAGGGATTATTTATAAAGACCCTAATCTCTTTGGGGATTTGGTGGGCTCTGTTTTGGGGCAGAGTTCTAAGAGTAGTAACAATGTTCCTCTGAAGAATGCCACGCCTATTTCGAAGGCATCAGGTACCACATCGAACAAGAGCTGGTTTTCCATGGGAAATATGGCGGATTCTTTGCCTAAAACTAGTAGTACAGTGCAAAGTAATGGAAGTTGGGGATCTTCCGGGAATTTTGGGAGTTATTCTAGCGGCTACAATAATAATAATAATAATAATAATAATAATACTAGTCTAAACTCCAATAAGACCACCAATATTGGGGGTCCTTCGTTGCGCAGTATGAATAATGGTGGTGGAGCAGCTGGAAGTGGAATGAGTTCTAATAAAGATCCCTTTGGTTCTTTGGCTGGTTTTGGATTCAAACAATCTAGTAGTCTTAGTTCAGCTGGCAAAGCCAAAGAGAATAATACAGGGCATGACGGTTTTGGGGATTTTCAGAGTGCTTCCAAACCAAGCTCTACCTCATTCCCATCAAGTAATCTTAATTCAGCTGGCAAAACCAAAGAGAATAATACAGGGGATGATGGATTTGGGGTTTTTCAGAATGCTCCCAAACCAAGCTCTACCTCATTCCCATCAAATAATTCAGCAGCAAATAATGTCAATGTGAATGGATCTGCCACTTCGAGTCAGAAGCCCGTGCAGACTTCAGGTGGTGATCCATTGGAGATGTTTTTCTCATCTTCCTCGGCCTCAGCTGGAACTGCTGCTACGGCATCTGAAGGATTTGGAACACAGCCCTCTTCTGAAATTGACGACTGGGGCTTAGATTCTGAATTTGGCGGGGGAGGCCATGATGTGGGAGGTACAACCATTGAGCTTGAAGGACTTCCACCTCCTCCCGCTGGTGTATCTGGTTCCACAGCAAAAGGTAAGGGGATGGACAATTACAAACAGGGGCAGTTTGCTGATGCTGTAAAGTGGCTTTCCTGGGCCGTCATCCTTCTTGAGAAGGCAGGTGACAATGCAGGCACAGCGGAGGTTTTGTCATGCAGGGCTTCATGTTACAAAGAAGTTGGAGAGTATAAGAAAGCAGTAGCAGATTGTTCCAAGGTGCTTGAAAATGACAAAACAAATGTATCTGTCCTCGTACAGCGTGCTCTCTTATATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGGACCGTTCTGAATATTGATCCTAGTAATAGGGTTGCAAGAAGTACCATTCACCGGTTGAATAAGATGGCTGATTAG 1632 0.4498 MNSSYGKSNQQKGSSVSMNNFNFEFDLGIGSNRPRSLNDQKNNASSNSYFSSSSSSSFSSAQPRPAWQPNKPSWTHQPTPSLAAQPGLPSGPTSMVGDISGKSWGSTQPSASNSSIGIIYKDPNLFGDLVGSVLGQSSKSSNNVPLKNATPISKASGTTSNKSWFSMGNMADSLPKTSSTVQSNGSWGSSGNFGSYSSGYNNNNNNNNNNTSLNSNKTTNIGGPSLRSMNNGGGAAGSGMSSNKDPFGSLAGFGFKQSSSLSSAGKAKENNTGHDGFGDFQSASKPSSTSFPSSNLNSAGKTKENNTGDDGFGVFQNAPKPSSTSFPSNNSAANNVNVNGSATSSQKPVQTSGGDPLEMFFSSSSASAGTAATASEGFGTQPSSEIDDWGLDSEFGGGGHDVGGTTIELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAVKWLSWAVILLEKAGDNAGTAEVLSCRASCYKEVGEYKKAVADCSKVLENDKTNVSVLVQRALLYESMEKYKLGAEDLRTVLNIDPSNRVARSTIHRLNKMAD 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1115 543 PANTHER OS03G0340700 PROTEIN 293 543 - -
Bisa08g1115 543 MobiDBLite consensus disorder prediction 24 112 - -
Bisa08g1115 543 ProSiteProfiles TPR repeat profile. 495 528 IPR019734 GO:0005515
Bisa08g1115 543 MobiDBLite consensus disorder prediction 137 161 - -
Bisa08g1115 543 Gene3D Tetratricopeptide repeat domain 421 542 IPR011990 GO:0005515
Bisa08g1115 543 MobiDBLite consensus disorder prediction 96 112 - -
Bisa08g1115 543 MobiDBLite consensus disorder prediction 33 88 - -
Bisa08g1115 543 MobiDBLite consensus disorder prediction 258 426 - -
Bisa08g1115 543 SUPERFAMILY TPR-like 425 536 IPR011990 GO:0005515
Bisa08g1115 543 SMART tpr_5 495 528 IPR019734 GO:0005515
Bisa08g1115 543 SMART tpr_5 461 494 IPR019734 GO:0005515
Bisa08g1115 543 SMART tpr_5 421 454 IPR019734 GO:0005515
Bisa08g1115 543 MobiDBLite consensus disorder prediction 198 243 - -
Bisa08g1115 543 MobiDBLite consensus disorder prediction 258 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1115 Bisa-ChrBisa08 20487060 20489259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1115 436 540 Calmodulin-binding Proteins AT3G25230 31.481 4.44e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1115 08 20487060 20489259 Bisa08g1115 08 20487060 20489259 ECH