Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1113 ATGTGTGGGGGTGCTATCATTTCCGACTTCATTGCCGTCAAGCGTGGCCGGAAGTTGACCGCCGGCGAGCTCTGGTCTGACCTCGACCCTCTCGACCTCCTTGGCTTCGACTGTGCCGCCAAACACCAACCTTCCCCTCCCTTTGATAAAAAACAACCTCAAATCCCTACCAACAAAGGAGTGGGATGTGAGAAGAAAAGCGTGGGCGCAGAGAAGGCAAAATCGGAAGGGAAACGCAGCGAGACAGTGAGGGCTCGGAAGAACGTGTACAGAGGAATAAGGCAGAGGCCATGGGGGAAATGGGCCGCCGAGATCCGAGACCCACGCAAGGGCGTGCGAGTGTGGCTCGGCACATTCAACACCGCCGAGGAAGCCGCCAGAGCCTACGACGAAGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAGCTCAACTTCCCCCTTCACCACCACCCCCCTCCTCCGTCGCCGCACCCGGAGCGACCTGCCAAGAAGCGCTGCCTCAGCCCCGCCCTCAGCCAGGCCAGCAACCAACCCACCGGCCCACCGTCGCCGCCGCCGCCGCCTTATTACGAAGCCCCTCTGGACCTCAAGCAGCAAATCTCCAGCCTCGAGTCGTTGCTTGGTTTGGACCCCGAGGAGGAGCCTCAGGAAACTAGTGAGCAGTTGAGTGGAATTAACGGCGGCGAGTGGCCGGAGGCGATGGACCTGTGGATGCTGGACGACGTCGTTTTGCAACACATGCCTAACCGTCACCTGGTCTATTAA 765 0.6065 MCGGAIISDFIAVKRGRKLTAGELWSDLDPLDLLGFDCAAKHQPSPPFDKKQPQIPTNKGVGCEKKSVGAEKAKSEGKRSETVRARKNVYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDEAAKRIRGDKAKLNFPLHHHPPPPSPHPERPAKKRCLSPALSQASNQPTGPPSPPPPPYYEAPLDLKQQISSLESLLGLDPEEEPQETSEQLSGINGGEWPEAMDLWMLDDVVLQHMPNRHLVY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1113 254 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 MobiDBLite consensus disorder prediction 178 192 - -
Bisa08g1113 254 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Bisa08g1113 254 Pfam AP2 domain 89 138 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 MobiDBLite consensus disorder prediction 65 83 - -
Bisa08g1113 254 PANTHER DNA-BINDING DOMAIN 72 195 IPR044808 GO:0003700|GO:0009873
Bisa08g1113 254 SUPERFAMILY DNA-binding domain 89 147 IPR016177 GO:0003677
Bisa08g1113 254 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 FunFam Ethylene-responsive transcription factor 2 88 148 - -
Bisa08g1113 254 MobiDBLite consensus disorder prediction 43 83 - -
Bisa08g1113 254 CDD AP2 90 145 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 SMART rav1_2 89 152 IPR001471 GO:0003700|GO:0006355
Bisa08g1113 254 MobiDBLite consensus disorder prediction 143 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1113 Bisa-ChrBisa08 20475823 20477319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1113 1 246 AP2-EREBP Transcription Factor Family AT3G16770 48.913 2.09e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa08g1113 AP2 1.8e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1113 08 20475823 20477319 Bisa08g1113 08 20475823 20477319 ECH