Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1108 ATGGCGACGGAGGGATCGGTGCCCGCGGGCAGCTCCCGGTATGTTCAACTACCGCCGGAGCCCCCGTCGATGGTGATGTCGCCCGTCGCAGCTTTCCGGCAGGGTGGCCCTGATCCCGCTCGAATTTTCCATGAATTGCCTCGAGCTGCCATCGTCTCCGTCTCTCGTCCCGATGTCGGCGACATCAGTCCCATGCTTCTCTCTTACACCATTGAGTTCCAATACAAACAATTCAAGTGGCAATTAGTGAAGAAAGCTTCTCAAGTATTTTATTTGCATTTTGCACTGAAGAAACGTGCATTTATTGAGGAAATTCATGAAAAGCAAGAGCAGGTTAAAGAGTGGCTTCAAAATCTAGGAATAGGAGAACACACCACTATAGTGCATGATGATGATGAAGCAGATGATGAAACTATTCTGCCTCATGACGAAAGTGCTAAAGACAGAGACGTTCCATCTATTGCTGCCTTACCAATTATACGCCCTGCCTTGGGAAGACAAGAGTGTATATCAGACAGAGCAATGATTGCTATGCAAGGATATCTCAATCACTTTTTTGGAAATATTAGCATTGTTAACTCTCCAGAGGTTTGCAGGTTTCTGGAGGTCTCAAAGTTATCGTTCTCTCCTGAATATGGCCCTAAGTTGAAGGAAGATTATGTGATGGTAAAGCATCTTCCAAACATTTTAAAGGACGATGATTCTAGAAAATGTTGTATATCTAACTGTTTCAGTTGTTGCAACGACAACTGGCAAAAGGTTTGGGCTGTACTAAAAGCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATACCCAACCTTTGGACATTATTGTCTTTGATGTACTTCCTACCTCAAATAGGAATAGAGAAGGTTGTCTATCACGAGCTGAGGAAATGAAGGAACAAAACCCTTTACGCCATTCATTCAAGGTGACTTCTGGAAATCGATGCATTAGAATAAGAGCAAAAAGTAGTGCTAAAGTTAAAGATTGGATTGCCGCTCTTAATGATGCTGGACCAAAACCTCCTGAAAGCTGGTGTCATCCTCATCGCTATGGTTCTTTTGCTCCTCCCAGAGGGTTGATTGAAGATGGTAGTCAGGCTCAATGGTTCATAGATGGTCGAGCAGCATTTGAGGCCATTTCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATTTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTGCGGCGTCCTTTTCACTTGCGTGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAGGCTAATCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTATCTACAGCAAGAAAAAGCTTCTTAGCATTCACAAGAATGTGAGGGTATTACGTTATCCTGATCACTTTTCTTGTGGTATTTACATGTGGTCCCACCATGAAAAACTAGTTATTGTTGATCACCATATTTGCTTTATTGGAGGACTGGATTTATGCTTCGGTCGTTATGACACATCTGAACACAAAGTGGGAGATTTCCCTCCTTTGATCTGGCCTGGAAAGGACTATTATAACCCTAGGGAATCTGAACCAAATTCATGGGAAGATACCATGAAAGATGAATTGGATCGTGGAAAATATCCTCGTATGCCTTGGCATGATGTCCACTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAACGATGGAATTATGCAAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTTATACCTCGGCATCATATGGTTATTCCGCACTACTTGGGAAGAGACAAAGAATTGGAGATTGAATGTGAAAGTTCTAACAATGGTAGAACCATGAGAAGGGATGATTCCTTTTCCTTAGCATCCCAAAATATCCCTCTACTTTTGCCTCAGGAATCTGACGGGCCACATACTCCTGAAGGATACCCAAAATCAAATGAGTTAAGCACCTCTTCACATCTTGATCGGCCAAGCAGGATGAGCACTGCCCTTCCTTTCTCTTTGCAGAAGGCCAATGTTGAACCTGTTGGTCCAGCTACACCAATGAAAGAAGATGAACTTGATTGTGTGGATTCTAACAAGAAAATGTCTCAGGATAGAGTGGCGCATGTCAGAACAAAAAGTACAGATCCAGAATGGTGGGAAAGACAAGAGCGGGGTGGTCAGGGAGGCTTTGCAGATGAATCTGGGCAAGTTGGTCCTCGTGCTTCCTGCCGCTGTCAGGTTATTAGGAGTGTCAGTCAATGGTCTGCTGGGACTAGCCAAACTGAACAGAGCATCCACAATGCTTATTGCTCCCTTATTGAGAAAGCAGAATACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGCAGATGAGATGATACAAAATCGTGTGTCAGAAGCTTTATTTCAACGGATAATGCGAGCTTACAGTGATCAAAAAATTTTTAGGGTTATAATTGTCATACCCCTCCTTCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACCAAAATCTATATTACATAATCTATACGATCTTCTTGGTCCAAAACTACATGATTACATATCTTTCTATGGCCTCAGGGCCCATGGTAGACTCTTTGATGGTGGTCCTTTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATAATGATTGTCGATGACTGTACAACTTTGATTGGATCTGCTAACATTAATGATAGAAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTATAGTTATAGAAGACACACAGTTCACTGGTTCATACATGGGGGGGAAACCATGGAAAGCAGGAAAGTTCTCACTGACTCTTCGATTATCACTATGGTCTGAACACTTGGGCCTCCAAGCAGGAGAGATTGATCAAATAGTGGACCCGGTTGTTGAGTCTACTTATAATGACATTTGGATGGCAAGAGCAAAGGCAAATACTGCAATTTACCAGGATGTCTTTTCTTGCGTACCAAATGATATGATACACTCCAGATTTGCTTTCAGAAAAAGCTCAGCTTTCTGGAAAGAAAAAGTTGGCCACACTACCATTGATATAGGAATTGCCCCAAAAAATTTAAAATCTTATGATAATGGCAGTATCAAGAATGTTGATCCCTTGGTTAGATTAGCTTCCGTGAAGGGTCATCTTGTTTCTTTTTCCTTGGAGTTCATGTGTCAAGAAAATCTAAAACCTGGTTTCAGTGAAAGCGAGTACTACGCTTCTCAACTTGAACCTCGGTGTCTAACTGGTGTGTTTAAAGGAAGGAAAGGAGAGGAAACAACTCTACAGTCTTCAAATCGCCCTTTTGTTCTGAATATTATGGTTATGGAGGCCACATCAAGGACGAATCATCTTTCACTTCCTCAGATTTTGCAGGCAATAGAAACTGAGCCTTTTCTCCATCAGTTCAAGTGGGATTGGAATGTAGAGGAGGCCATGGTTCTGTTTACATCTCTTGTGAATGGACTGGCGAGAACTGTGTCCTTGAAGAGAGAGAAGAACAGTCACAAGGAAGACGACGATGGAAGGAAAGCAGTGGAAGAATTGGCGAAAGAAGCAAAGAAGAATGAACTGTTGTTGAGATCATCTGGAATTGTCAGGTCTGAGAAGGCCAACACTTTTGCTTCTGTGTTCTCCAAGAGAGGCAGGAAAGGGACCAATCAGGATCGCCTCACCGTTTGGGAGGAATTCGGATGTCAAGATGACATGATGTTCTGTGGAATATTTGATGGGCATGGGCCATGGGGACACTTTGTGGCCAAAAGGGTGAGGGAATTAGTGCCTGCTTCTTTGCTGTGCCATTGGCAGCAAACTCTGGCTGCAACATCCCTAGACCTTGACTTCAAATTGGAATCAGACAGAAAACTTCACTGGTTTGACACATGGAAGCAGTCCTACCTCAAGACTTGTGCTTCTGTGGATCTGGATCTCAAGAACCACACTGGCTTTGATTCCTTTAGAAGTGGCACCACTGCTCTCACAATCATCAAACAGGGTGAACATCTCGTCATAGCAAATTTGGGAGATTCTAGGGCTGTCTTGGCAGTTGCTTCTGAGGATGATGATGGCACATTGATTCCTCTTCAACTTACCACTGACTTGAAGCCTAATTTGCCAGAGGAGGCAGAGAGGATAAAGCAGTGCAGAGGGAAGGTGCTGTGCATGGAGGATGAACCAGGAGTGTACAGAGTGTGGATGCCAAATGGGAAGAGTCCGGGGCTGGCCATCTCAAGGGCCTTTGGGGATTACTGTGTGAAGGAGTTTGGACTCATCTCTGAGCCTCATCTCACTCACAGAACACTCACCTCTAGGGATCACTTCCTCATCCTCGCAACTGATGGGGTGTGGGATGTTATATCAAACGAAGAAGCAGTGGAGATAGTATCGTCAACGGCACAGAAGGAGAAAGCAGCACAGAGACTTGTTGAATGCGCCGTACATCAATGGAAGCGCAAGAAAAGAAGCATTGCCATGGATGATATGTCCGCCATTTGCCTCTTCTTGCACTCTTCTTCGTCCCCTGCATCTCATGCTCTCCCAACTTCTAAAACTTTCAAATAA 4647 0.4379 MATEGSVPAGSSRYVQLPPEPPSMVMSPVAAFRQGGPDPARIFHELPRAAIVSVSRPDVGDISPMLLSYTIEFQYKQFKWQLVKKASQVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTIVHDDDEADDETILPHDESAKDRDVPSIAALPIIRPALGRQECISDRAMIAMQGYLNHFFGNISIVNSPEVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPNILKDDDSRKCCISNCFSCCNDNWQKVWAVLKAGFLAFLADPFDTQPLDIIVFDVLPTSNRNREGCLSRAEEMKEQNPLRHSFKVTSGNRCIRIRAKSSAKVKDWIAALNDAGPKPPESWCHPHRYGSFAPPRGLIEDGSQAQWFIDGRAAFEAISSSIEDAKSEIFICGWWLCPELYLRRPFHLRASSRLDNLLEAKANQGVQIFILLYKEVALALKINSIYSKKKLLSIHKNVRVLRYPDHFSCGIYMWSHHEKLVIVDHHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLIPRHHMVIPHYLGRDKELEIECESSNNGRTMRRDDSFSLASQNIPLLLPQESDGPHTPEGYPKSNELSTSSHLDRPSRMSTALPFSLQKANVEPVGPATPMKEDELDCVDSNKKMSQDRVAHVRTKSTDPEWWERQERGGQGGFADESGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHNAYCSLIEKAEYFIYIENQFFISGLSADEMIQNRVSEALFQRIMRAYSDQKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGPKSILHNLYDLLGPKLHDYISFYGLRAHGRLFDGGPLATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGIVIEDTQFTGSYMGGKPWKAGKFSLTLRLSLWSEHLGLQAGEIDQIVDPVVESTYNDIWMARAKANTAIYQDVFSCVPNDMIHSRFAFRKSSAFWKEKVGHTTIDIGIAPKNLKSYDNGSIKNVDPLVRLASVKGHLVSFSLEFMCQENLKPGFSESEYYASQLEPRCLTGVFKGRKGEETTLQSSNRPFVLNIMVMEATSRTNHLSLPQILQAIETEPFLHQFKWDWNVEEAMVLFTSLVNGLARTVSLKREKNSHKEDDDGRKAVEELAKEAKKNELLLRSSGIVRSEKANTFASVFSKRGRKGTNQDRLTVWEEFGCQDDMMFCGIFDGHGPWGHFVAKRVRELVPASLLCHWQQTLAATSLDLDFKLESDRKLHWFDTWKQSYLKTCASVDLDLKNHTGFDSFRSGTTALTIIKQGEHLVIANLGDSRAVLAVASEDDDGTLIPLQLTTDLKPNLPEEAERIKQCRGKVLCMEDEPGVYRVWMPNGKSPGLAISRAFGDYCVKEFGLISEPHLTHRTLTSRDHFLILATDGVWDVISNEEAVEIVSSTAQKEKAAQRLVECAVHQWKRKKRSIAMDDMSAICLFLHSSSSPASHALPTSKTFK 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1108 1548 SMART pld_4 476 503 IPR001736 GO:0003824
Bisa08g1108 1548 SMART pld_4 904 931 IPR001736 GO:0003824
Bisa08g1108 1548 MobiDBLite consensus disorder prediction 655 671 - -
Bisa08g1108 1548 Gene3D Endonuclease Chain A 720 961 - -
Bisa08g1108 1548 ProSiteProfiles PPM-type phosphatase domain profile. 1236 1530 IPR001932 -
Bisa08g1108 1548 SUPERFAMILY PH domain-like 247 339 - -
Bisa08g1108 1548 Coils Coil 98 118 - -
Bisa08g1108 1548 SUPERFAMILY Phospholipase D/nuclease 330 596 - -
Bisa08g1108 1548 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 904 931 IPR001736 GO:0003824
Bisa08g1108 1548 CDD PLDc_vPLD1_2_yPLD_like_1 369 513 - -
Bisa08g1108 1548 Gene3D - 244 342 IPR011993 -
Bisa08g1108 1548 Pfam Protein phosphatase 2C 1244 1509 IPR001932 -
Bisa08g1108 1548 PANTHER PHOSPHOLIPASE D 175 1093 IPR015679 -
Bisa08g1108 1548 Pfam PLD-like domain 778 950 IPR025202 -
Bisa08g1108 1548 ProSiteProfiles PH domain profile. 250 341 IPR001849 -
Bisa08g1108 1548 SUPERFAMILY PP2C-like 1226 1531 IPR036457 -
Bisa08g1108 1548 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 476 503 IPR001736 GO:0003824
Bisa08g1108 1548 MobiDBLite consensus disorder prediction 640 671 - -
Bisa08g1108 1548 SMART PH_update 215 343 IPR001849 -
Bisa08g1108 1548 SMART PP2C_4 1227 1528 IPR001932 -
Bisa08g1108 1548 SUPERFAMILY Phospholipase D/nuclease 745 952 - -
Bisa08g1108 1548 CDD PH_PLD 192 339 - -
Bisa08g1108 1548 FunFam Phospholipase 738 958 - -
Bisa08g1108 1548 Gene3D Endonuclease Chain A 363 593 - -
Bisa08g1108 1548 CDD PP2Cc 1236 1529 IPR001932 -
Bisa08g1108 1548 CDD PLDc_vPLD1_2_yPLD_like_2 764 948 - -
Bisa08g1108 1548 FunFam Probable protein phosphatase 2C 34 1227 1532 - -
Bisa08g1108 1548 Gene3D - 1223 1533 IPR036457 -
Bisa08g1108 1548 Pfam Phospholipase D Active site motif 476 503 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1108 Bisa-ChrBisa08 20346815 20368855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1108 1 984 Phospholipase D Gene Family (Wang group) AT3G16785 69.526 0.0 1348