Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1076 ATGTCAACGGTTAGTTCCAGTGCTTCTTGGAAATTCGATGGAGACAGCGTCGGCGATCAGTTTTCGGCTGGGCTCCGGGTGCTGGTTATGGATGATGATCCCACGTGTCTCATGATCCTCGAGAGGATGCTTCGCACTTGCCGCTACGAAGTTATGAAATGCAATCGAGCCAAAGTTGCATTGTCTCTTCTGAGAGAGAACAAAAATGGGTTTGACATAGTTATAAGTGATGTGCATATGCCAGACATGGATGGCTTGATGTCAGCAAATGATGGAAAGAATGTTGTTATGAAAGGTGTGACATACAGTGCTTGCGATTACCTGATAAAACTGCAAAAGCCATCTGATGAAGCTGAGAACTCATCCTCTACAAATGAAGGAAACTGGAGAAGTGCTAAGAAGAAGAAGGACGAGGAGGAAGAAGCCAAGGAGAAGGATGATGCATCCACGTTAAAGAAGCCACGAGTTGTTTGGTCCGTTGAGCTCCATCAACAGTTTGTGGTAGCTGTGAATCAACTCGGAATCGACAAGGTTGTACCTAAGAAAATTCTGGAATTGATGAATATTCCTAGGCTTACTAGAGAAAATGTTGCTAGCCATCTCCAGAGTAACATGAATAACTCTTTCATCAGCCCACAAGAAGTAAACTTTGGGACATTGCCAGCCTTTAATGGCATTGATCTTCAAACTCTAGCACCTGTTGGCCAGATTCCGGTACAGAGTCTAGCAACACTTCAAGCAGTGGGACTTGGTAGATCAACTGCTAAAGCTGGTGTATCTGTGTCCCTTGTTGGTGAAAGAAACCTATTCAGCTTCAAAAACCCGAGATTAAGATTTGGTGAAGGACAACAGCAACACTTGAGCAGTACTAAACTGATGAACTTACTTCATGGAATCCCCACCAACATGGAGCCAAAACAGCTTGCCACTTTGCACCAATATCACAGTCCCTTGGCAACCTGA 963 0.4434 MSTVSSSASWKFDGDSVGDQFSAGLRVLVMDDDPTCLMILERMLRTCRYEVMKCNRAKVALSLLRENKNGFDIVISDVHMPDMDGLMSANDGKNVVMKGVTYSACDYLIKLQKPSDEAENSSSTNEGNWRSAKKKKDEEEEAKEKDDASTLKKPRVVWSVELHQQFVVAVNQLGIDKVVPKKILELMNIPRLTRENVASHLQSNMNNSFISPQEVNFGTLPAFNGIDLQTLAPVGQIPVQSLATLQAVGLGRSTAKAGVSVSLVGERNLFSFKNPRLRFGEGQQQHLSSTKLMNLLHGIPTNMEPKQLATLHQYHSPLAT 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1076 320 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 227 IPR045279 GO:0009736
Bisa08g1076 320 Gene3D - 15 91 - -
Bisa08g1076 320 SUPERFAMILY Homeodomain-like 150 202 IPR009057 -
Bisa08g1076 320 SUPERFAMILY CheY-like 24 110 IPR011006 -
Bisa08g1076 320 MobiDBLite consensus disorder prediction 129 150 - -
Bisa08g1076 320 FunFam Two-component response regulator 149 207 - -
Bisa08g1076 320 SMART REC_2 25 122 IPR001789 GO:0000160
Bisa08g1076 320 Gene3D - 150 208 - -
Bisa08g1076 320 NCBIfam myb-like DNA-binding domain, SHAQKYF class 153 203 IPR006447 GO:0003677
Bisa08g1076 320 ProSiteProfiles Response regulatory domain profile. 26 196 IPR001789 GO:0000160
Bisa08g1076 320 Pfam Myb-like DNA-binding domain 155 203 IPR001005 -
Bisa08g1076 320 Pfam Response regulator receiver domain 27 87 IPR001789 GO:0000160
Bisa08g1076 320 MobiDBLite consensus disorder prediction 116 150 - -
Bisa08g1076 320 CDD REC_typeB_ARR-like 27 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1076 Bisa-ChrBisa08 19666161 19671663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1076 59 304 Response Regulator Gene Family AT3G16857 47.941 1.88e-83 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa08g1076 Response_reg 3.9e-11 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1076 08 19666161 19671663 Bisa08g1076 08 19666161 19671663 ECH