Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1071 ATGCAAAAGAATCCTAACATATTTGATCTGCCTGCGGCTGGTGCGCGTGTGTCCGTTCGATTCCTCTCTCTCCTTTCTCTCTCTCCCTCTGCACGCACACATCCTTCCCTCACTGCATGTCGGTTTTCTCATCATAGAGCCGTTGCTTTCCTTTCTCATCTTCTTCTCACTCTCACCTCACTCCCATTCGTTCCTCGTCAAGAATATTCGCTTCTTAGATCCGCTTCTTCTCTGGTTCTAATCAAGAAGCAAAGCAAGAGCTTCACTCAATACCTCGCAACCCACTTCCCTCGGCCACTTGTTCTCATCTGGGTTTCTCCCGGATCTTCGAAATCTCTCTCGGAAATGGTGGATCCGAGTGGCAAAGGATCAGAAGCCGAGGAGGCTAATGCGAGAAATCCGAACGGGGCTTCGTCGGAAGAGAGCCCAACAATGGGCGAGCTGAAGAAGACCTGCGCCGATTGCGGAACGAGCAAGACTCCTCTCTGGCGAGGCGGTCCTGCTGGTCCCAAGTCACTGTGCAACGCGTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATTCTGGGTTTGAACAAGGGAAGCAATGAAGAGAAGAAGGGAAAGAGGAGCACTAACAATGGAGGCAGTAAGATTGGGGATAGTTTGAAGCAGAGATTATTGGCTTTGGGGAGGGAGGTATTGATGCAGAGATCGACGGTGGAGAGGCAGAGAAAGAAGCTGGGAGAGGAAGAACAAGCAGCAGTTCTGTTAATGGCTCTCTCTTATGGCTCAGTTTATGCTTAG 786 0.5064 MQKNPNIFDLPAAGARVSVRFLSLLSLSPSARTHPSLTACRFSHHRAVAFLSHLLLTLTSLPFVPRQEYSLLRSASSLVLIKKQSKSFTQYLATHFPRPLVLIWVSPGSSKSLSEMVDPSGKGSEAEEANARNPNGASSEESPTMGELKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGLNKGSNEEKKGKRSTNNGGSKIGDSLKQRLLALGREVLMQRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1071 261 Pfam GATA zinc finger 152 186 IPR000679 GO:0006355|GO:0043565
Bisa08g1071 261 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 148 186 - -
Bisa08g1071 261 Gene3D - 147 211 IPR013088 GO:0006355|GO:0008270
Bisa08g1071 261 MobiDBLite consensus disorder prediction 114 151 - -
Bisa08g1071 261 MobiDBLite consensus disorder prediction 190 205 - -
Bisa08g1071 261 ProSitePatterns GATA-type zinc finger domain. 152 177 IPR000679 GO:0006355|GO:0043565
Bisa08g1071 261 SMART GATA_3 146 196 IPR000679 GO:0006355|GO:0043565
Bisa08g1071 261 MobiDBLite consensus disorder prediction 131 145 - -
Bisa08g1071 261 ProSiteProfiles GATA-type zinc finger domain profile. 152 182 IPR000679 GO:0006355|GO:0043565
Bisa08g1071 261 MobiDBLite consensus disorder prediction 188 215 - -
Bisa08g1071 261 PANTHER OS01G0976800 PROTEIN 122 261 - -
Bisa08g1071 261 CDD ZnF_GATA 151 203 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1071 Bisa-ChrBisa08 19574105 19576106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1071 116 261 C2C2-Gata Transcription Factor Family AT3G06740 57.143 5.80e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa08g1071 GATA 3.6e-16 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1071 08 19574105 19576106 Bisa08g1071 08 19574105 19576106 ECH