Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1063 ATGTCAAAAGGAACAAGTCTGGTACTGGAATCATCTGAAAATGGCACAGATTTATCTCAGGATGATATTGGCACCATTGAGGAAACACCAGAAGAGTCAATTTTGTCACGACAAACTTCTGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTTTATTGCAGTTTTGCAAAACAATGTGGCTTTTCTATTAGACGGCATCGAACGCGAGGAAAGGATGGAGTTGGTCGGGGAGTTACTAGAAGGGATTTTACTTGCCATCGTGGTGGGTATCCCCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGGAATCGCAAATCATCACGTTGTGGTTGTCTAGCATATATGCGCATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGCTTTAGCAACATCCACAATCATGAGTTGTTAAAAACCAATGAGGTGCGACTTCTTCCAGCATACTGTACAATATCTCCGGATGACAAGAGTCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGTTAAGATTGATGGAGCTTGAAAAAGGCATCAAACTTGGTTGTTTACCTTTTACAGAGATTGATGTGAGAAATTTGTTGCAGTCTTTTAGAAACGTTGATAGAGATAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTAAAAGATGAAAATCACAACTTCAAATATGAATTTAAGATAGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCCTATGCTGGTTCTATCCAATCATATGAGGCATTTGGAGATGCTGTGGTTTTTGATACAACCCACCGTCTAGAGGCCTATGACATGTTGTTGGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGTGCACTTCTGCGTGATGAGAATATGCAGTCTTTTTCATGGGCTCTTAAGGCATTCTTAAGCTTCATGGAAGGAAAGACTCCACAAACTATATTAACTGACCATAACATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCTTGAAACCAAACATGCGTTTTGCATATGGCACATTATTGCTAAGTTTTCTGACTGGTTTTCTGTACTTCTTGGATCACATTATGATGATTGGAAAGCTGAGTTCCATCGGCTCTACAATTTGGAACTGGTGGAAGATTTTGAAGAAGGCTGGAGACAAATGGTTGATAATTATGGACTCCATGCAAATAAGCATATTGTTAGCTTATATTCATTGAGGACATTTTGGGCTTTACCATTTTTGAGGTGTTGCTTCTTTGCAGGATTGACCAACACATGTCAGTCCGAGTCCATTAACGCTTTCATCCAACGGTTCTTGAGTGCCCAATCTCAACTAGATCGCTTTGTAGAGCATGTGGCTGATATTGTTGAATTTAATGACCGGGCTGGAGCAAAGCAAAAGATGCAACGAAAATTGCAGAAAGTGTGCCTTAAAACTGGTTCACCAATCGAATCCCATGCTGCTACCGTGCTTACTCCATATGCCTTTAGCAAGCTCCAGGATGAGCTAGTTTTGGCACCACAATATGCATCATTTCTGGTTGATGAAGGTTGCTTCCAGGTCAGACACCACACTCAGATGGACGGAGGGTGCAAAGTATTTTGGGTTGCTTGTCAAGAACATATCAGCTGCAGCTGCCATCTGTTTGAGTTTTCAGGCATCTTATGCAGACATGTTTTGCGTGTCATGTCAACTAATAACTGTTTTCACATCCCTGAACAATATCTACCTGCCCGCTGGCGTGGTGTGAGTTCATCTTCTGCTAACTCCTTCCGAGGTACAACTTCCAGGGATCATCCTGAAAGAATACAATTCTTGGAATCCATGGTTTCTACACTTGTAATGGAATCCATTGAAACAGAAGAACGCCTTGGTGTTGCTTGTGAGCAAATTTCCATGGTTTTGTCACGTATTAAAAGCCTTCCGAGGTCAGCACATGGGGTGAATGACATTACATATAATTATCAATCAGATTCACTGATTCTACCGGAAGTGGAAGATGCAGATGGTATGATTCATGGTTTTACAATTGCAAATCCTCATGATTCTATCACATTAGGTAAACTAAAGGAGAGAAGGGCAAGAGATGGAGTGGATATAACTAGGAAGCGAAGGCATTTTTCAGGGCCATTGTGTGGGCAATATGGACACGATGCATCTGATTGCTCGACAATGGCTGGTGATAATTTGAATGGCGATACATTAGAGTACTCGTAG 2277 0.4089 MSKGTSLVLESSENGTDLSQDDIGTIEETPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCLAYMRIVKRADFDVPEWRVTGFSNIHNHELLKTNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYAGSIQSYEAFGDAVVFDTTHRLEAYDMLLGIWLGVDNHGMTCFFGCALLRDENMQSFSWALKAFLSFMEGKTPQTILTDHNMWLKEAIAVEMLETKHAFCIWHIIAKFSDWFSVLLGSHYDDWKAEFHRLYNLELVEDFEEGWRQMVDNYGLHANKHIVSLYSLRTFWALPFLRCCFFAGLTNTCQSESINAFIQRFLSAQSQLDRFVEHVADIVEFNDRAGAKQKMQRKLQKVCLKTGSPIESHAATVLTPYAFSKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVACQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPEQYLPARWRGVSSSSANSFRGTTSRDHPERIQFLESMVSTLVMESIETEERLGVACEQISMVLSRIKSLPRSAHGVNDITYNYQSDSLILPEVEDADGMIHGFTIANPHDSITLGKLKERRARDGVDITRKRRHFSGPLCGQYGHDASDCSTMAGDNLNGDTLEYS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1063 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Bisa08g1063 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 628 IPR031052 GO:0006355
Bisa08g1063 758 SMART 26again6 562 589 IPR006564 GO:0008270
Bisa08g1063 758 MobiDBLite consensus disorder prediction 1 32 - -
Bisa08g1063 758 MobiDBLite consensus disorder prediction 1 23 - -
Bisa08g1063 758 Pfam SWIM zinc finger 554 584 IPR007527 GO:0008270
Bisa08g1063 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Bisa08g1063 758 Pfam MULE transposase domain 275 367 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1063 Bisa-ChrBisa08 19524799 19527619 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa08g1063 MULE 8.5e-20 CL0219