Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1061 ATGATGTCCCCGGTTCAAGATACAATATCGTCGAAGAAAGTATCAACGGGAAGAGCTCCTTGCTGTGACAAAGAGGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAGGACAGAATCTTGACCAACTATATCCAGCAAAATGGTGAGGGCTCTTGGAGGTCCTTGCCCCAGAATGCAGGTTTGTTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATTAACTATTTGAGAGCAGATGTGAAGAGAGGAAACATCACTCCTCAAGAAGAAGCCATCATTGTGAAGCTTCATGCTGCTCTTGGAAATAGGTGGTCAATAATAGCTGGGTATCTCCCAGGAAGAACAGACAATGAGATAAAGAACTACTGGAACTCTCATCTCAGAAGAAAAATCTACTGCTTCATGAAACCCTCCAACGACTCCCTCCCTCCCATCGACATGGCTGCTCTCAACGCAGTTGCTTCCTCCAAACGACGAGGTGGTCGAGGCCGGCCCTCCAAACCGGCCCTGCAAAACGACGTTGCGTTGAACCAAGACTCACACATCGATCTCAAACCACGCCATGTGTCGGACAAAATGTCTCAGAGAAAAGCGACCCCACAGAGCTTCAATGGAGGGGAAGCTGAGGAGATTTCGATGATGAGTTGGAGCCTCAGTCACCAAGAAGAGTCCCCTGGAGGCTCTGGTGTGGATGCTTTTTGTCCCACCATGGATGGAGAGGTTGAAGCCCTAGGGTCATACCAGTGGCTAGACGACGAAATTATGAGACTCAATTTCATGATTGAGAATGGGATGCTTGTAGACCCAAGTGAAAATGGAGGGGGTAATAATGAGGAGACAAATATGGGATTCACAACTGAAGAGACAAAAAATGGTGTTTGGAGCTCAGAGTATGCAGGTGGAAACCAGTGGTATTACAATAATAATAATAACACTAGCTGTTCACCATCAGTGAATTCGGTTTGTGATGATTATCAATGGCTTGATTGGGACCAATCTCAGATTCAGTGGGACCTGCAGAGTGAAGAGAATCAGATGGTGACATGTTTGTGGGACACTGCTGCAAATGATGAAATAAATAACTTTCATGGAGTTGCGTAG 1101 0.4641 MMSPVQDTISSKKVSTGRAPCCDKEGLKKGRWTAEEDRILTNYIQQNGEGSWRSLPQNAGLLRCGKSCRLRWINYLRADVKRGNITPQEEAIIVKLHAALGNRWSIIAGYLPGRTDNEIKNYWNSHLRRKIYCFMKPSNDSLPPIDMAALNAVASSKRRGGRGRPSKPALQNDVALNQDSHIDLKPRHVSDKMSQRKATPQSFNGGEAEEISMMSWSLSHQEESPGGSGVDAFCPTMDGEVEALGSYQWLDDEIMRLNFMIENGMLVDPSENGGGNNEETNMGFTTEETKNGVWSSEYAGGNQWYYNNNNNTSCSPSVNSVCDDYQWLDWDQSQIQWDLQSEENQMVTCLWDTAANDEINNFHGVA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1061 366 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 17 190 - -
Bisa08g1061 366 SMART sant 81 129 IPR001005 -
Bisa08g1061 366 SMART sant 28 78 IPR001005 -
Bisa08g1061 366 Pfam Myb-like DNA-binding domain 82 127 IPR001005 -
Bisa08g1061 366 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Bisa08g1061 366 Gene3D - 86 131 - -
Bisa08g1061 366 Gene3D - 26 82 - -
Bisa08g1061 366 SUPERFAMILY Homeodomain-like 26 123 IPR009057 -
Bisa08g1061 366 MobiDBLite consensus disorder prediction 156 206 - -
Bisa08g1061 366 FunFam Myb transcription factor 26 82 - -
Bisa08g1061 366 CDD SANT 31 76 IPR001005 -
Bisa08g1061 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Bisa08g1061 366 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Bisa08g1061 366 MobiDBLite consensus disorder prediction 180 194 - -
Bisa08g1061 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 76 IPR017930 -
Bisa08g1061 366 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Bisa08g1061 366 CDD SANT 86 127 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1061 Bisa-ChrBisa08 19457396 19461338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1061 17 257 MYB Transcription Factor Family AT5G49330 49.004 3.11e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g1061 Myb_DNA-binding 3.6e-12 CL0123