Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1049 ATGGCGAATAACTTAACGGGGCAACTCGTTGGCTCAGAGATACATGGATTCCATACATTGCCAGAGCTGGATGTTGGGAACATTATGAAGGAAGCAGGAAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTTTGCAATCACAAGTATTTCCCCATCAAAGTCAAGCCAGTGCTTTTGCCCAAAAGTGGTACTATTGTATTGTTTGACCGCAAGATGCTCAGGAACTTTCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGATGGGAAAACTGTAAAAGAAGCTCATGAGCACTTAAAAGTTGGTGATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGATAATCCAAGCTTTGTTCGCAGATGTTATTGGCTTCTCGATAAGAGTTTGGAACACATAGTACTTGTTCATTACCGTGAAACACAAGAGGTTTTGTCTATTTTCCTTTCCTTCCTCCATTCAAATTCTAGTTCGATATCTGATCCAACTGCACCATGGATTAAATCAGAAGAATCAGATTCGGGGACCAACAATCCATATGCTGCTGAGGCTAATGACAATTTAAAAGTCAAGAATCATGAACTGAGGCTTCTTGAGCTTAATACGCTTGAATGGGATGATCTAGTGGTTACAAATGATCTTAACACTTCTAACACGTCAATTGGAGACAAAGTTCCATGCTTTGAACAACGAAATCAATCTTTACTGAATGACAGTATGACTAATGTAGCTAGCAATCTGTCTGCAGAAATTCCTTCTTTTGCTAATATAATGCAGCAAATTGCTGGGAGCAATGGTGCACCTTATACTTTTCCAGAAACAGTAAATCTTCAGACAGTAAACAATCAAGTAAATCCAAATATTCAGAAGGGATATCCTATTTCGGTGGGTGGTGTTGATTCCTTGGACACTTTGCAGAGTCAGGACAGCTTTGGAAGGTGGATGAACCACATGATTTCTGATGCACAATGTTCTGTAGATGAGTCAGCTCTTGTATCCTCAGTTCCATCTATTCAAGAACTATATTCTTCTCTGGCAGTGGATCATCAGCAACCTTTTCTGCCAGAACAAGTTTTTAATCTCAATGATGTATCACCTGTATGGGCATCTTCCACTGAGAAAACTAAGATCCTGATCACTGGAATCTTTCATGATGACTATATGCATCTTGCAAAGTCAAATCTATATTGTGTCTGTGGTGATGTGAGTGTTCAAGCTGAAATGGTTCAAGGTGGGGTCTACCGATGTTGGGTATTTCCACATTCCCCTGGATTTGTGAATTTCTATTTGAGCTTTGATGGTCATAAGCCCATTAGCCAAGTTATCAATTTTGAGTATCGCACTCCAATTTTGCATGACCCTGCAGCCTCTATGGAAGAAAGGTACAACTGGGACGAGTTTCGACTTCAAACGAGGCTTTCTTATTTGCTCTTCGGTACACAAAAGAGTCTTGATCTTTACTCTAGTAAAGTATCAGCTGTTGCACTGAAGGTGGCTAGGAACTTTGCCTTTAGGACCTCATACCTTTCCAAAAGTTGGCAAGATTTGATCAAGTCAATTGAGGACAACAAAAATCCATTTCCTCAAGCAAAAGATGCACTGTTTGAAATGTCATTGAAAAACAGACTAAAGGAATGGCTTTTAGAAAAAATTCTCTTAGGCCAGAAGACTACTGAATATGATTCCCAAGGTCAAGGTGTAATCCATTTGTGCACAATTTTGGGATATAGTTGGGCTATTTCCTTATTTTCTTGGTCGGGATTCTCACTGGATTTCCGCGATCAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGTGAGAAAATGGTTGCAACTTTGTTATCTGCTGGGGCAAAGCCTAACTTGGTCACAGACCCTACTCCACAAAATCCTGGTGGCTGTACTGCTGCTGATCTTGCTTATATGAAGGGTTATGATGGCTTAGCAGCCTATCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCAAACTGGAAACAAGCACAACTGATCCCGTAGAATATGATAATCTCACTGAGGACCAGCTGTACTTGAAGGATACATTGGCAGCCTACCGGATAACTGCTGAGGCTGCAGCACGGATACAGACTGCATTTAGAGAGCACTCATTAAAATTACGAGCAAAGGCAGTCCAGGCTTTAAGTCCGGAGGATGAAGCACGTATAATTGTTGCAGCACTGAAGATTCAACATGCCTTTCGCGATTATGAGACAAGGAAGAAGATGAGAGCTGCTGCTCACATCCAGCATAGGTACCGTACATGGAGAATCCGTAAAGAATTTCTCAACATGCGACGTCAGGCGATCAAAATTCAAGCTGCTTTCCGGGGTTTCCAAGTGCGGAAGCAGTACCATAAAATTCTTTGGTCTGTTGGTGTGCTTGAGAAAGCAATCCTTCGTTGGCGATTAAGAAGAAAAGGCTTCCGTGGCCTCCAGGTTAATCCTGTCCAAGAAGTGGGAGTTCAGAACCAGGAAAGTGATATAGAGGAGGACTTCTTTCGGACTGGTAGGAAACAAGCCGAAGAACGTATCGAGAAATCTGTAGTACGTGTTCAGGCCATGTTCCGTTCTAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGGCTCACAATCAAGCAAAGCTGGAACTTGAAATTGAAGAGCTGCTCAATTCAGGGGTTGATATGCGGTAG 2745 0.4179 MANNLTGQLVGSEIHGFHTLPELDVGNIMKEAGSRWLRPNEIHAILCNHKYFPIKVKPVLLPKSGTIVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGDEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHIVLVHYRETQEVLSIFLSFLHSNSSSISDPTAPWIKSEESDSGTNNPYAAEANDNLKVKNHELRLLELNTLEWDDLVVTNDLNTSNTSIGDKVPCFEQRNQSLLNDSMTNVASNLSAEIPSFANIMQQIAGSNGAPYTFPETVNLQTVNNQVNPNIQKGYPISVGGVDSLDTLQSQDSFGRWMNHMISDAQCSVDESALVSSVPSIQELYSSLAVDHQQPFLPEQVFNLNDVSPVWASSTEKTKILITGIFHDDYMHLAKSNLYCVCGDVSVQAEMVQGGVYRCWVFPHSPGFVNFYLSFDGHKPISQVINFEYRTPILHDPAASMEERYNWDEFRLQTRLSYLLFGTQKSLDLYSSKVSAVALKVARNFAFRTSYLSKSWQDLIKSIEDNKNPFPQAKDALFEMSLKNRLKEWLLEKILLGQKTTEYDSQGQGVIHLCTILGYSWAISLFSWSGFSLDFRDQFGWTALHWAAYCGSEKMVATLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGYDGLAAYLSEKSLVEQFNDMSLAGNISGKLETSTTDPVEYDNLTEDQLYLKDTLAAYRITAEAAARIQTAFREHSLKLRAKAVQALSPEDEARIIVAALKIQHAFRDYETRKKMRAAAHIQHRYRTWRIRKEFLNMRRQAIKIQAAFRGFQVRKQYHKILWSVGVLEKAILRWRLRRKGFRGLQVNPVQEVGVQNQESDIEEDFFRTGRKQAEERIEKSVVRVQAMFRSKKAQEEYRRMKLAHNQAKLELEIEELLNSGVDMR 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1049 914 Coils Coil 880 909 - -
Bisa08g1049 914 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 896 - -
Bisa08g1049 914 SMART ANK_2a 639 670 IPR002110 GO:0005515
Bisa08g1049 914 SMART ANK_2a 600 629 IPR002110 GO:0005515
Bisa08g1049 914 ProSiteProfiles Ankyrin repeat profile. 600 632 IPR002110 GO:0005515
Bisa08g1049 914 ProSiteProfiles IQ motif profile. 748 774 IPR000048 GO:0005515
Bisa08g1049 914 ProSiteProfiles IQ motif profile. 867 896 IPR000048 GO:0005515
Bisa08g1049 914 ProSiteProfiles IQ motif profile. 787 811 IPR000048 GO:0005515
Bisa08g1049 914 MobiDBLite consensus disorder prediction 161 182 - -
Bisa08g1049 914 Gene3D - 766 811 - -
Bisa08g1049 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 814 IPR027417 -
Bisa08g1049 914 ProSiteProfiles IQ motif profile. 764 793 IPR000048 GO:0005515
Bisa08g1049 914 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Bisa08g1049 914 FunFam calmodulin-binding transcription activator 5 530 670 - -
Bisa08g1049 914 Pfam Ankyrin repeats (3 copies) 554 629 IPR002110 GO:0005515
Bisa08g1049 914 SUPERFAMILY Ankyrin repeat 555 662 IPR036770 -
Bisa08g1049 914 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Bisa08g1049 914 Pfam CG-1 domain 32 144 IPR005559 GO:0003677
Bisa08g1049 914 SMART CG_1_2 28 146 IPR005559 GO:0003677
Bisa08g1049 914 SMART iq_5 744 766 IPR000048 GO:0005515
Bisa08g1049 914 SMART iq_5 767 785 IPR000048 GO:0005515
Bisa08g1049 914 SMART iq_5 710 732 IPR000048 GO:0005515
Bisa08g1049 914 SMART iq_5 786 808 IPR000048 GO:0005515
Bisa08g1049 914 SMART iq_5 866 888 IPR000048 GO:0005515
Bisa08g1049 914 Coils Coil 185 205 - -
Bisa08g1049 914 Gene3D Immunoglobulins 359 454 IPR013783 -
Bisa08g1049 914 ProSiteProfiles Ankyrin repeat region circular profile. 600 628 - -
Bisa08g1049 914 Gene3D - 532 669 IPR036770 -
Bisa08g1049 914 SUPERFAMILY E set domains 365 451 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1049 Bisa-ChrBisa08 19100399 19112107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1049 28 900 CAMTA Transcription Factor Family AT3G16940 55.416 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bisa08g1049 Ank_2 3.7e-06 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g1049 08 19100399 19112107 Bisa08g1049 08 19100399 19112107 ECH