Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g1005 ATGAGATCCGACACCCATATCTTGTTTTCTCTTGTTATTGCATCATCGATCACAATTGCTTATTCAAAAGAATCAAAGCCTCCTTCAGATTCACATTCTTTTGTCATTTCTTGTGGCATTTCTTCCAACGTGGGTACAGATTCTGTTGGCAGAAGGTGGCGATCAGATTATACATTCTTGACCTCATCCACTAACACGATAAACTCAACAGCACAATCTCAAGACCCTTCTCTTCCTTCCCAGATTCCTTACATGTCTGCAAGAATCTTCACTTCCCCGACCACATACAGATTCTTTATCTCCCCCAACGATCGCCACTGGCTTCGACTCCATTTTTACCCTTCAGAATATAGCACCCTTAATCCCTCTGATGCATACTTCTCAGTTTCTGCAAATAACCTTACTCTTCTCAACAATTTCAGCTCTTTCATCACAGCAGAAGCCTTCACACAAGCCTATTTCATCAAAGAATACTCTCTCTTACCTGTCCAATCTGGTGAACTCAACATCACATTCGCTCCCTCTTTAATGCACAATGGAACATATGCTTTTATCAATGGGATTGAGATAATCTCCATGCCTGAGATTTTCGAGCCTGTCATGTTGGTTTCTACTGACCAATTTGTTGATGTTCAGAATAGTTCGTTGCAGACTATGTTTCGATTGAATGTTGGAGGACAGTACATAGCACCCACCAATGACTCTGGTCATTTAAGCAGGACATGGTACGATGATACCCCCTATTTGTTTGGAGCAGCAAGTGGGGTCACTTTTGGAGCTAATGACAATGTGACGATTCAATACCCTTCTGATATGCCTCACTCAATTGCCCCTTTGGATGTTTATGGCTGTGCAAGATCAATGGGTCCAAATGCTAGTGTCAACCTGAACTATAACCTCACTTGGGTGTTTCAGGTTGATCCAAACTTTACATATGTTATTAGGCTTCATTTCTGTGAATTACTAGTAACCAAAGTTAACCAAAGGGTGTTTGGTATTTACGTTAATAATCAAACTGCTCAAGATGCTGCCGATGTTATAGCCTGGACAGGATCAAGAGGGGTTCCTACTTATAAAGACTATGCAATTTATGTCAACGATGGACCGGGTAATCAAGAATTATGGGTAGCGTTGCACCCTTCGATGTCAACGAAACCAGAGTACTATGATGCTATTCTTAACGGGTTGGAGGTGTTTAAGGTTAATGACAACAAAAGTAACTTAGCTGGGCCTAATCCTGTACCATCAAATATGTTTCTTAAAGATGAAGCTGAGAAGCATTTTAGCAACTCAAAAACCAATCACGCTCCAGTAATAGGAGGGGTTACTGGAGGAGCTGTTGGGGTTGCTCTTGTTGTTGCTGTATGCTGTATCGTCTATAGAAAGAGAAAACATTATTATGGGAATGATACTGTTGCTCGGAATTGGTTGCCTCTATATGGGAATTCTCATACTAGCAAATCAGCTATGTCTGGTGCTAGCAGTCTTTCAACTTTGAGACAAGGATTATGCAGACATTTTCCATTACCTGAGATCATACATGCTACAAAGAACTTCGATGAATCGCAGGTTATTGGTGTTGGTGGGTTCGGGAAAGTCTATAGTGGTGTCATAGATGGAGGGACCAAAGTGGCTATAAAGAGAGCAAGCTCATCTTCAGACCAAGGAGTTTTGGAGTTTCAAACGGAAATTGACATGCTTTCGAAGCTAAGGCACAAACATTTAGTCTCTCTGATCGGTTTTTGCGAAGAAAATGGTGAAATGATCTTAGTTTATGATCACATGGCCAATGGAACCCTCAGAGAGCACCTATATAAAAGCAACAAGCCAGCTTTACCATGGAAGCAGAGGCTAGAAATATGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGTGCCAAGTTCATCATCATTCACAGGGATGTGAAAACCACAAATATACTATTAGATAATAAATGGGTAGCAAAAGTTTCCGATTTTGGATTATCCAAAAGTGGCCCAACTCTGCACCAAACCCATGTCAGCACAGTGGTGAAAGGTAGCTTTGGATACTTAGATCCTGAGTACTTCAAAAGGCAACAACTCACAGAAAAATCTGATGTATACTCTTTTGGGGTGGTTCTTTTTGAAGCGTTGTGTGCAAGGCCAGCATTAGATCCTAGCTTGCCAAAAGAGCAGGTAAGTTTAGCAGATTGGGCTTTGTTGTGTCAAAGGGAGGGAACTTTGGAGAATATTATTGATCCTAGACTTAGAGGCAAAATCAACCCTGAGTGCTTGCAGAAATTTACGGAGAACGCTTTGAAATGCGTAGCTGATCAGGGCATTGAAAGGCCTTCAATGGGTGATGTGTTGTGGAACCTTGAGTTTGCTCTTCAGTTGCAGGAGAATCCTGAAGGAGGAGAACAAATAGCAGAAGTGAAGGCAACTGATGCTTATACTATTCATAATGCTATTGCTATGTTGAACATTGAAGAAGGGAGTACAAGTACTAAAATCAACGAGATTGATGATTCAGCTGTAGTTTTTTCACAGATTTTTGAGCAAAAAGGGAGATAA 2562 0.4122 MRSDTHILFSLVIASSITIAYSKESKPPSDSHSFVISCGISSNVGTDSVGRRWRSDYTFLTSSTNTINSTAQSQDPSLPSQIPYMSARIFTSPTTYRFFISPNDRHWLRLHFYPSEYSTLNPSDAYFSVSANNLTLLNNFSSFITAEAFTQAYFIKEYSLLPVQSGELNITFAPSLMHNGTYAFINGIEIISMPEIFEPVMLVSTDQFVDVQNSSLQTMFRLNVGGQYIAPTNDSGHLSRTWYDDTPYLFGAASGVTFGANDNVTIQYPSDMPHSIAPLDVYGCARSMGPNASVNLNYNLTWVFQVDPNFTYVIRLHFCELLVTKVNQRVFGIYVNNQTAQDAADVIAWTGSRGVPTYKDYAIYVNDGPGNQELWVALHPSMSTKPEYYDAILNGLEVFKVNDNKSNLAGPNPVPSNMFLKDEAEKHFSNSKTNHAPVIGGVTGGAVGVALVVAVCCIVYRKRKHYYGNDTVARNWLPLYGNSHTSKSAMSGASSLSTLRQGLCRHFPLPEIIHATKNFDESQVIGVGGFGKVYSGVIDGGTKVAIKRASSSSDQGVLEFQTEIDMLSKLRHKHLVSLIGFCEENGEMILVYDHMANGTLREHLYKSNKPALPWKQRLEICIGAARGLHYLHTGAKFIIIHRDVKTTNILLDNKWVAKVSDFGLSKSGPTLHQTHVSTVVKGSFGYLDPEYFKRQQLTEKSDVYSFGVVLFEALCARPALDPSLPKEQVSLADWALLCQREGTLENIIDPRLRGKINPECLQKFTENALKCVADQGIERPSMGDVLWNLEFALQLQENPEGGEQIAEVKATDAYTIHNAIAMLNIEEGSTSTKINEIDDSAVVFSQIFEQKGR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g1005 853 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Bisa08g1005 853 Gene3D - 30 194 - -
Bisa08g1005 853 Gene3D - 215 403 - -
Bisa08g1005 853 CDD STKc_IRAK 525 790 - -
Bisa08g1005 853 Gene3D Transferase(Phosphotransferase) domain 1 595 813 - -
Bisa08g1005 853 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Bisa08g1005 853 FunFam Receptor-like protein kinase FERONIA 595 807 - -
Bisa08g1005 853 FunFam FERONIA receptor-like kinase 214 402 - -
Bisa08g1005 853 SMART serkin_6 519 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1005 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Bisa08g1005 853 ProSiteProfiles Protein kinase domain profile. 519 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g1005 853 PANTHER OS03G0124300 PROTEIN-RELATED 8 465 IPR046957 GO:0004672
Bisa08g1005 853 SUPERFAMILY Protein kinase-like (PK-like) 497 792 IPR011009 -
Bisa08g1005 853 FunFam FERONIA receptor-like kinase 33 194 - -
Bisa08g1005 853 Pfam Protein tyrosine and serine/threonine kinase 522 786 IPR001245 GO:0004672|GO:0006468
Bisa08g1005 853 FunFam receptor-like protein kinase FERONIA 482 594 - -
Bisa08g1005 853 Pfam Malectin-like domain 36 401 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g1005 Bisa-ChrBisa08 18117143 18119704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g1005 29 853 Receptor kinase-like Gene Family AT3G51550 55.696 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bisa08g1005 Malectin_like 3.2e-38 CL0202