Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0999 ATGGGAACTCCACCAGCGGAAGAGATTCTCAAGAAGATCGAGGACCTCGAGGCGGGTCACGCACACCTCAAGCAAGAAATGTCCAATCTGAAGCTCTCGGGCGCGAGCGATGCTAGAGGCGAGCAGGGTTATCATCGCCAGAGGTCTCACTCGATATCGCCACAGCGTTCGAGATTTGGTGCGCCCAGAAGGAGAGCTGTAGGTGGAGTATTCGACGGACCAGCTTCGTGGAAGAAAGGGTCATCTTCGTTTAAACATTCGTCACCGCTTCAGAGGGAAAGCCGTAGTAGTGATCCTCAGAATGATGGAGAAGGTGGCGTTGGAAGGGGCCCTTCAGCTGTGAATTTAACTGATAGGCAGTATCTGAATATTCTGCAGTCAATGGGACAGTCTGTTCATATATTAGATCTTGACGGTCGTATAATATACTGGAACCGTAGTGCTGAAAATCTTTATGGTTATTCAGCAGAAGAAGCCCTTGGTCAGGATGGCATTGAGCTACTTGTTGACCCCAAGGATTTTGCCCTAGCACATGACATAGTCAACCGAGTCACTATGGGAGAGAAATGGACTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGACAAGTTTTTAGCTGTAGCAACCAATACTCCTTTCTATGATGATGATGGAAGTTTGGTTGGGATTATTTGTGACTCTAGTGATTCACGACCCTTTCTTGAAATGAGAGTTCCATTCTCAGGTGTAAAGCACTTTGAAACAGATTCTGGCTCCAGCAGTCTAAAGAGTAGCATTACAACTAAACTTGGTCTTGACTCTCAACAACCACTTCAAGTTGGTCTAGCATCAAAAATTTCAAATTTGGCATCCAAGATGAGTAACAAAGTTAAGTCAAGAATCCGAACCAGCGAAAATAACGTGGATCGCGAAGGTGGAAGTGGAGAAAGCCATCATTCTGAGCATAGCTTCCCAGAATCTGTTCTTTCTGACCAGAGGGAGGATGCTAATTCAAGTGGAGCTAGCACACCCAGAGGAGAAGTGCCACCATCTCCTTTTGGTGTATTTTCTCATGTAGAAGACAAACAACAAGGAAAAAATTTAAGAGACTTTGGCGATGAGAGTGAAGGAAAACCTATTCATAGAGTCTTAACTTCCAAGGCTGAAGCTTGGATTCAAAAGAAAACAATGTCATGGCCATGGAAAACGAATGAGCGAGATGGGTCAGAGGGAAGGAACGTCCGTGCTGCTTGGCCTTGGCTGCAGAATGATCAAGAAAATGAGCCTGTTCAGCGTAATGTTCTTTCTTCTGGCACAAGGATTGAGAGCCAGGCAGGAGAAAGTAATCGACCTCTTAATAATGAAGTGTCAGGATCCTGGTCCTCCTCCTTCAATGTTAACAGCACAAGTAGTGCCAGCAGCTGTGGGAGTGGCAGCAGCTGTGTTGTGAATAATAAAGTGGACATGGATAGTGATTGCTTGGATTATGAAATCTTGTGGGAGGACCTCACCATTGGAGAACAAATTGGGCAAGGTTCATGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCTGTCAAGGTATTCTCCAAGCAAGAATACTCAGATGATATACTGATGTCCTTCAGGCAAGAGGTGTCTGTTATGAAAAGACTACGACATCCAAATGTTGTTCTTTTCATGGGGGCAGTGACTTCACCTCAACGTCTCTGTATTGTGACTGAGTTCCTCCCACGCGGAAGCTTGTTTCGCTTACTCCAAAGAAACACAGCCAAACTTGACTGGCGACGTAGAGTTCATATGGCCTTAGATATTGCACGAGGTGTTAACTATCTTCATCATTGCAACCCACCTATTGTTCATCGAGATTTGAAGTCCTCAAATCTTCTAGTTCATAAGAACTGGACTGTTAAGGTTGGTGATTTTGGTCTTTCGCGTATAAAGCATGAAACATATCTCACAACCAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAATTCTTCGTAATGAGCCCTCAGATGAGAAGTCTGACGTATACAGCTTTGGGGTGATACTGTGGGAACTTACAACTGAAAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTGGTTGGAGCTGTTGGGTTCATGAATCAGCGGCTAGAAATTCCAAAAGATGTTGATCCAAAGTGGGCCGCCATAATTGAGAGCTGCTGGCAAAGTGATCCAGCTTGCCGGCCCACATTCCAGGAACTGCTTGAAAGGCTTCGAGAGCTGCAGAAACGGTATGATCTTCAGTTTCAAGCAGCCCGATCAGGTGGGGAAATCACCCAGAAGGAGTCCTAG 2322 0.4565 MGTPPAEEILKKIEDLEAGHAHLKQEMSNLKLSGASDARGEQGYHRQRSHSISPQRSRFGAPRRRAVGGVFDGPASWKKGSSSFKHSSPLQRESRSSDPQNDGEGGVGRGPSAVNLTDRQYLNILQSMGQSVHILDLDGRIIYWNRSAENLYGYSAEEALGQDGIELLVDPKDFALAHDIVNRVTMGEKWTGQFPAKNKMGDKFLAVATNTPFYDDDGSLVGIICDSSDSRPFLEMRVPFSGVKHFETDSGSSSLKSSITTKLGLDSQQPLQVGLASKISNLASKMSNKVKSRIRTSENNVDREGGSGESHHSEHSFPESVLSDQREDANSSGASTPRGEVPPSPFGVFSHVEDKQQGKNLRDFGDESEGKPIHRVLTSKAEAWIQKKTMSWPWKTNERDGSEGRNVRAAWPWLQNDQENEPVQRNVLSSGTRIESQAGESNRPLNNEVSGSWSSSFNVNSTSSASSCGSGSSCVVNNKVDMDSDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDILMSFRQEVSVMKRLRHPNVVLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCNPPIVHRDLKSSNLLVHKNWTVKVGDFGLSRIKHETYLTTKTGKGTPQWMAPEILRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVVGAVGFMNQRLEIPKDVDPKWAAIIESCWQSDPACRPTFQELLERLRELQKRYDLQFQAARSGGEITQKES 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0999 773 PRINTS Tyrosine kinase catalytic domain signature 656 666 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 PRINTS Tyrosine kinase catalytic domain signature 719 741 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 PRINTS Tyrosine kinase catalytic domain signature 609 627 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 PRINTS Tyrosine kinase catalytic domain signature 675 697 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 PRINTS Tyrosine kinase catalytic domain signature 570 583 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 FunFam PAS domain-containing protein tyrosine kinase family protein 574 765 - -
Bisa08g0999 773 Pfam PAS fold 120 225 IPR013767 GO:0006355
Bisa08g0999 773 SUPERFAMILY Protein kinase-like (PK-like) 484 748 IPR011009 -
Bisa08g0999 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Bisa08g0999 773 SMART pas_2 119 186 IPR000014 -
Bisa08g0999 773 MobiDBLite consensus disorder prediction 323 338 - -
Bisa08g0999 773 SMART serkin_6 496 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0999 773 Gene3D Phosphorylase Kinase; domain 1 489 573 - -
Bisa08g0999 773 NCBIfam PAS domain S-box protein 119 225 IPR000014 -
Bisa08g0999 773 MobiDBLite consensus disorder prediction 80 96 - -
Bisa08g0999 773 Gene3D PAS domain 129 231 - -
Bisa08g0999 773 MobiDBLite consensus disorder prediction 291 322 - -
Bisa08g0999 773 FunFam PAS domain-containing protein tyrosine kinase 489 573 - -
Bisa08g0999 773 Coils Coil 6 33 - -
Bisa08g0999 773 Gene3D Transferase(Phosphotransferase) domain 1 575 760 - -
Bisa08g0999 773 ProSiteProfiles PAS repeat profile. 117 188 IPR000014 -
Bisa08g0999 773 Pfam Protein tyrosine and serine/threonine kinase 496 748 IPR001245 GO:0004672|GO:0006468
Bisa08g0999 773 ProSiteProfiles Protein kinase domain profile. 496 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g0999 773 MobiDBLite consensus disorder prediction 20 114 - -
Bisa08g0999 773 SUPERFAMILY PYP-like sensor domain (PAS domain) 123 225 IPR035965 -
Bisa08g0999 773 CDD PAS 128 229 IPR000014 -
Bisa08g0999 773 CDD STKc_MAP3K-like 502 748 - -
Bisa08g0999 773 MobiDBLite consensus disorder prediction 287 350 - -
Bisa08g0999 773 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 217 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0999 Bisa-ChrBisa08 18020073 18028289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0999 1 765 MAP Kinase Kinase Kinase AT3G06620 61.460 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa08g0999 PK_Tyr_Ser-Thr 2.8e-68 CL0016