Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0979 ATGGAGGAGAACAGAGAGGAACATCGACAACAACAACAACAACAACAACAACAGATCAGCAGCAAAAGCACTTGGACGACGTCGTCTTCATCGTTCACGACTATCATGGCAAATTCTCTGGCATTCTCCGACGAGATTCCGATGACGAGCAACCCCTTTGCCCCACCGCCACTGCCACCACCTCCTTCTTCTTTCTCCACCATCTTCGACATCACGCCTCTCTCGGGCGATTACAACCTCAAGCCCAATCATAACAATTACTCCTCTGCTTTCATGGACTTGCTGGGCCTGGGCCTCCAAGATTACAACCCTTCCTTATTCGATTGGCTCCCTTCCTCCTTCGCCGCCGACACCACCACCGCCGTCGCCACCACCCACGGCCCGATTCCGTCTCCTTCTCCGGCGCCCGAGTCCTCCGAGGTCTTGAACACCCCGGTGTCCCCCAATTCCTCCTCCATCTCGTCCTCCTCCAATGAAGCCCCCCTCAACAACAGCTCAATGGACGAACCGCAGAGCAGCGGTAAAGCAGAGAACGATCGCGAACCGGACGATGAAGACAACGCACAAGATCACGACAAGTCTAAGAAACAGCCCCTGAGACCAAAGAAGAAGAACCAAAAGAAACAAAGAGAACCCAGATTTGCGTTCATGACAAAGAGTGAAGTGGATCACTTAGACGACGGCTATAGATGGCGCAAATATGGCCAAAAAGCTGTTAAAAACAGCCCCCATCCCAGGAGCTATTATCGTTGCACCACGGCCGGGTGCGGCGTGAAGAAGAGGGTGGAGAGGTCGTCGGAGGACCCGTCGATCGTGGTGACGACGTACGAGGGGCAGCACACGCACCCAAGTCCGGCGACGTGCCGGGGGAGCCTCGGGTTCGGGCCGGGGAGCGGCGGCGCCCTGGTGTCGCCACACTTTATGGTTCCACGGGCACAACAGCATCAGCAACAAGCGGCTGCTTTGTTCTATAGCTCAGCCCCACTACTACCTTCGAGTATTAGCTCGTCTACTAGTTATAAGGATCCGACGTCGTATAGCAGCTTGGTTCAAGATCATCATCATCATGTAGGTTTTGGACCATCGTCGGCTCAAGCTAATTTGTCGAGGGACATTGGGCTTCTTCAGGACATTATTGTGCCAATGAAGGAGGAGGAGAAAGATCAAGAACATCAGATTTATATATTTAGCAAGGTTAAGTGTTCACCACCCATACTGTTTCTCGAGGAAGTAACCACTAATTAA 1245 0.5293 MEENREEHRQQQQQQQQQISSKSTWTTSSSSFTTIMANSLAFSDEIPMTSNPFAPPPLPPPPSSFSTIFDITPLSGDYNLKPNHNNYSSAFMDLLGLGLQDYNPSLFDWLPSSFAADTTTAVATTHGPIPSPSPAPESSEVLNTPVSPNSSSISSSSNEAPLNNSSMDEPQSSGKAENDREPDDEDNAQDHDKSKKQPLRPKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTTAGCGVKKRVERSSEDPSIVVTTYEGQHTHPSPATCRGSLGFGPGSGGALVSPHFMVPRAQQHQQQAAALFYSSAPLLPSSISSSTSYKDPTSYSSLVQDHHHHVGFGPSSAQANLSRDIGLLQDIIVPMKEEEKDQEHQIYIFSKVKCSPPILFLEEVTTN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0979 414 SUPERFAMILY WRKY DNA-binding domain 217 285 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g0979 414 MobiDBLite consensus disorder prediction 136 172 - -
Bisa08g0979 414 MobiDBLite consensus disorder prediction 11 27 - -
Bisa08g0979 414 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 136 314 IPR044810 GO:0003700
Bisa08g0979 414 MobiDBLite consensus disorder prediction 173 196 - -
Bisa08g0979 414 MobiDBLite consensus disorder prediction 1 27 - -
Bisa08g0979 414 FunFam WRKY transcription factor 57 211 285 - -
Bisa08g0979 414 MobiDBLite consensus disorder prediction 123 217 - -
Bisa08g0979 414 Pfam WRKY DNA -binding domain 226 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g0979 414 SMART WRKY_cls 225 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g0979 414 Gene3D WRKY domain 210 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g0979 414 ProSiteProfiles WRKY domain profile. 220 285 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0979 Bisa-ChrBisa08 17768687 17771999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0979 196 307 WRKY Transcription Factor Family AT2G47260 64.885 4.70e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa08g0979 WRKY 2.9e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0979 08 17768687 17771999 Bisa08g0979 08 17768687 17771999 ECH