Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0948 ATGACCCAAACAGATGATATGGCAGTGGAAGTAGAAGGAAGGCAGCTCCAAAACGACGACGATTCAGACCTCCGACGAGGCCCTTGGACCGTCGACGAGGACCTCACCCTCATCAATTACATTGCCTCCCACGGCGAAGGTCGCTGGAACTCCCTCGCTCGCTCCGCCGGGCTCAAACGAACTGGTAAGAGCTGCAGATTAAGGTGGCTCAACTATCTCCGACCCGACGTCCGACGTGGCAACATCACCCTCGAGGAACAACTTCTCATTCTTGAACTTCATTCTTGTTGGGGAAACAGATGGTCGAAAATCGCTCAGTATTTACCGGGAAGAACCGACAATGAGATCAAGAATTATTGGCGAACACGAGTCCAAAAGCAGGCGAAGCAGCTCAAATGTGACGTGAATAGCAAGCAATTCAAGGACACCGTGCGTTACCTCTGGATGCCCAGGCTGGCCGAGCGCATTCAAGCCTCCTCCGCCGCCGCCTCCGGTTCTCCGGCGATCCATCCATCCGCCACCGTCGTCGACGTCACTTCCAATTATAACAATTTCGAGTTTGGGGGCTCACAGGTAACGCAGAGTTTCAACAACACGACGGACAACAGCAGCACGGCGGCTTCCTCGGACTCGTTCGGGTCGACCCAGGTTTCGCCTATGTCGGACTTGTCGGATTATTGCTACGGCACCGCCGTGTTTGGTAACAAGGCTAACCCTAATCCGGAATATTCCAAAACGCCTCCTCTGAGCTACTCGGATTGCAGTTGCATCACCAGCAGCTCGGATATGTTATCCGTGGAGCCAAACTGCCGCAACAACAACAACGACCAGAGTAATTGGTTTCAGACTGGAGGAGGGGACACATCGGACAATTTCTGGAATGTTGAGAACATGCTGTTTTTACAGCAACAGCTGAGTGACAGCATGTAA 930 0.529 MTQTDDMAVEVEGRQLQNDDDSDLRRGPWTVDEDLTLINYIASHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSCWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKQLKCDVNSKQFKDTVRYLWMPRLAERIQASSAAASGSPAIHPSATVVDVTSNYNNFEFGGSQVTQSFNNTTDNSSTAASSDSFGSTQVSPMSDLSDYCYGTAVFGNKANPNPEYSKTPPLSYSDCSCITSSSDMLSVEPNCRNNNNDQSNWFQTGGGDTSDNFWNVENMLFLQQQLSDSM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0948 309 CDD SANT 28 73 IPR001005 -
Bisa08g0948 309 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Bisa08g0948 309 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 21 224 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa08g0948 309 Gene3D - 23 79 - -
Bisa08g0948 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Bisa08g0948 309 MobiDBLite consensus disorder prediction 193 214 - -
Bisa08g0948 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 77 IPR017930 -
Bisa08g0948 309 CDD SANT 99 122 IPR001005 -
Bisa08g0948 309 SUPERFAMILY Homeodomain-like 23 120 IPR009057 -
Bisa08g0948 309 Gene3D - 83 156 - -
Bisa08g0948 309 FunFam MYB transcription factor 83 146 - -
Bisa08g0948 309 SMART sant 78 126 IPR001005 -
Bisa08g0948 309 SMART sant 25 75 IPR001005 -
Bisa08g0948 309 MobiDBLite consensus disorder prediction 1 25 - -
Bisa08g0948 309 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Bisa08g0948 309 Pfam Myb-like DNA-binding domain 79 122 IPR001005 -
Bisa08g0948 309 FunFam Myb transcription factor 26 78 - -
Bisa08g0948 309 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0948 Bisa-ChrBisa08 17344762 17346491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0948 9 295 MYB Transcription Factor Family AT3G06490 51.070 3.62e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g0948 Myb_DNA-binding 6.3e-15 CL0123