Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0940 ATGATTGTGAGCCAGAAGATGGTAGCCGAGGCGGAAATTATCTGTCAGCAGAGCATTCCTGTGTTAGATGTGAAGTATCATCTCTGCGTTGCGCAAGAACACAACGTCAAGGTTGAGGTGTCACCCACCTCGCCTTCTGTTCCGATCTTTGGCCAAGCTGAGGATTGCACTGAGATCATTAATGATCCCATTGTAGAGATCTCTCCGGCCAAGTTCATCCCAAATGTGCGATCTGGATGCTATGCTGAAATCGGACCCCGGGTATCTATGGATGATGAACACATTCAAATAGATGATCTAGCTTCCCACCTTGGATTTATGTTCAAGACTCCTATACCATGTGCATTTTACGCAGTTTTTGATGGTCATGGAGGACCTGATGCAGCCTATTTTATTAAGAGGAATGCTATGAGACTATTTTTTGAAGATGCCAGTCTGCTGCAGTCATATGATACTGATGCATTAATTCTAAAGAAATTGGAGGATTCTCACCGGAGAGCTTTTTTACTTGCTGACCTTGCCTTGGCTGATGAAGAAACTGTTAGTAGCTCCTGTGGGACAACAGCATTGACTGCGCTTATACTTGGAAGACATTTACTGGTTGCAAATGCTGGTGATTGTCGGGCAGTTCTCTGCAGGAGAGGAGTAGCTGTTGAGTTGTCTCATGATCATAGACCAAGTTATTTAACAGAGAGGAGGAGAGTGGAGGAGTTAGGTGGTTTCGTTGATGATGGGTATCTCAATGGTTGTCTTTCTGTCACCCGAGCCCTTGGGGATTGGGACTTAAAATTCCCCCTTGGTTCAGCATCGCCTCTAATTGCTGATCCGGATGTTCAGCAGGTTACATTGACAGAGGATGACGAGTTCTTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCAAGTCAACATGCAGTTAGTCTTGTCCGCCAAGGGTTGAGAAGGCACGATGATCCACAGCAATGTGCTAGAGAGCTAGTCAAGGAAGCACTGCGATTGAATACATCTGATAATCTCACTGTGATTGTTGTATGCTTGTCCTCCATTGAAAGCATTGTTGAATCATGTCCATCCCAAAGGCAAAGATTCAGAGCTCGTTGTCTGTCTGAAGAGGCTCGTAGCAGATTGAGTAGCTTCATGGAGGGCAATTGA 1155 0.4528 MIVSQKMVAEAEIICQQSIPVLDVKYHLCVAQEHNVKVEVSPTSPSVPIFGQAEDCTEIINDPIVEISPAKFIPNVRSGCYAEIGPRVSMDDEHIQIDDLASHLGFMFKTPIPCAFYAVFDGHGGPDAAYFIKRNAMRLFFEDASLLQSYDTDALILKKLEDSHRRAFLLADLALADEETVSSSCGTTALTALILGRHLLVANAGDCRAVLCRRGVAVELSHDHRPSYLTERRRVEELGGFVDDGYLNGCLSVTRALGDWDLKFPLGSASPLIADPDVQQVTLTEDDEFLIIGCDGIWDVMSSQHAVSLVRQGLRRHDDPQQCARELVKEALRLNTSDNLTVIVVCLSSIESIVESCPSQRQRFRARCLSEEARSRLSSFMEGN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0940 384 Pfam Protein phosphatase 2C 87 339 IPR001932 -
Bisa08g0940 384 ProSiteProfiles PPM-type phosphatase domain profile. 77 347 IPR001932 -
Bisa08g0940 384 SMART PP2C_SIG_2 92 347 IPR001932 -
Bisa08g0940 384 CDD PP2Cc 76 347 IPR001932 -
Bisa08g0940 384 PANTHER PROTEIN PHOSPHATASE 2C 66 345 IPR015655 GO:0004722|GO:0006470
Bisa08g0940 384 Gene3D - 68 352 IPR036457 -
Bisa08g0940 384 SUPERFAMILY PP2C-like 70 348 IPR036457 -
Bisa08g0940 384 FunFam Probable protein phosphatase 2C 22 62 350 - -
Bisa08g0940 384 ProSitePatterns PPM-type phosphatase domain signature. 116 124 IPR000222 GO:0043169
Bisa08g0940 384 SMART PP2C_4 67 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0940 Bisa-ChrBisa08 17185227 17187037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0940 1 383 PP2C-type Phosphatase Gene Family AT1G48040 58.291 9.72e-153 434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0940 08 17185227 17187037 Bisa08g0940 08 17185227 17187037 ECH