Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0930 ATGGCTGTGGAAACTGAGGCTGCCACTACTCGAGAGTTGGCGCTAGCCGACACAGATATCAACTGGGACAGGTTGGATAAGACCAAGTTTCATGTCATTGGTGCCGTACTCTTCACTGCTCAATCAGCCTTGCTTCACCCAACTGCAGTGGTAAAGACAAGAATGCAGGTAGCTGGATCTGGACTCTCTGACATGAGAGGAACATCGGTATTTACTCACATATTAAAATACGATGGTATTCCTGGACTTTTTAGAGGTTTTGGTACTTCTGCTATTGGATCAATGCCTGGTAGGGTCCTTGCTCTAACATCACTTGAGATGTCAAAAGACTTTATGTTAAAATACTCTGAAGGTTTTGAAATGCCGGAGGCATCACGAATTGGTCTCGCAAATGGAGTGGCGGGCATGTTCTCAAATTTAGTTTCTTGTGTATACTTTGTGCCTTTGGATGTGATCTGCCAAAGGCTAATGGTACAAGGTCTTCCTGGAACTACGTACTGCAGTGGAGTGTTTGATGCTGTTCATAAAGTTATGAAGGCTGAGGGTTTTCGTGGCTTGTATAGAGGCTTTGGATTGACGGCTATTACCCAGTCACCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCAGCCCAACATATCATTTGGAGGAGTTTGGGCTATAGAGATGACACGGAGAAAAAGCCTTCACATATGGAAATGGTGACTGTCCAGGCTACAGCAGGAATGGTGGCTGGTGCCTGTTCATCTGTTATTACTACCCCCATAGATACTGTAAAAACACGGCTTCAGGTTATCGATGATTATGGTGTTGGAAGACCATCCGTACTGAAGACAACAAAGACACTCCTCAAGGAAGATGGATGGTGGGGATTTTACAGGGGATTTGGACCTCGATTTTTGAATATGTCACTTTATGGGACTACGATGATTGTTACTTATGAACTGATAAGTCCTCGTTTCTTTTTAGCGGTTCGATTTGTAGATGTCAGATTAGTGAAGAAAGGAATTAATTATCTCCCTGCTGACATTCTAGTTTTGCCAAGTTCTGATGATAATGTTTCATTGCCTGAGGGTAAACGGCAGCTTATTTTGGGTTCTCCTTCTTTCTTCTCTCTATCTCTATTGCTATCTTTATATACAATGGGGCTGTCTTTTACCAAGCTTTTCTCTCGTCTCTTTGCTAAGAAAGAGATGCGTATTCTTATGGTTGGTCTTGATGCTGCTGGTAAAACCACAATATTGTATAAACTCAAGTTGGGAGAGATTGTCACCACCATCCCTACTATTGGATTTAATGTGGAGACTGTAGAGTATAAGAACATCAGCTTCACTGTGTGGGATGTTGGGGGTCAGGATAAGATTCGGCCATTGTGGAGACACTACTTCCAAAACACCCAAGGGCTTATCTTTGTTGTGGACAGCAATGATCGAGATCGCGTTGTTGAGGCCAGAGATGAGTTGCACAGGATGTTGAATGAGGATGAATTAAGGGATGCTGTATTGCTTGTTTTTGCAAACAAACAAGATCTTCCCAATGCAATGAATGCTGCTGAGATCACAGATAAGCTTGGCCTGCATTCTCTCCGACAGCGCCATTGGTATATCCAAAGTACATGTGCTACTTCTGGGGAAGGATTATACGAGGGACTAGACTGGCTTTCAAACAACATTGCCAGCAAGGCTTAA 1689 0.434 MAVETEAATTRELALADTDINWDRLDKTKFHVIGAVLFTAQSALLHPTAVVKTRMQVAGSGLSDMRGTSVFTHILKYDGIPGLFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKYSEGFEMPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGTTYCSGVFDAVHKVMKAEGFRGLYRGFGLTAITQSPASALWWGSYGAAQHIIWRSLGYRDDTEKKPSHMEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVIDDYGVGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELISPRFFLAVRFVDVRLVKKGINYLPADILVLPSSDDNVSLPEGKRQLILGSPSFFSLSLLLSLYTMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0930 562 Pfam ADP-ribosylation factor family 386 558 IPR006689 GO:0003924|GO:0005525
Bisa08g0930 562 NCBIfam small GTP-binding protein domain 397 531 IPR005225 GO:0005525
Bisa08g0930 562 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Bisa08g0930 562 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Bisa08g0930 562 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Bisa08g0930 562 SMART rab_sub_5 399 561 - -
Bisa08g0930 562 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Bisa08g0930 562 CDD Arf1_5_like 399 557 IPR045872 GO:0003924
Bisa08g0930 562 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 318 - -
Bisa08g0930 562 FunFam ADP-ribosylation factor 1 382 562 - -
Bisa08g0930 562 Gene3D - 385 562 IPR027417 -
Bisa08g0930 562 PRINTS GTP-binding SAR1 protein signature 455 480 IPR006689 GO:0003924|GO:0005525
Bisa08g0930 562 PRINTS GTP-binding SAR1 protein signature 500 521 IPR006689 GO:0003924|GO:0005525
Bisa08g0930 562 PRINTS GTP-binding SAR1 protein signature 428 452 IPR006689 GO:0003924|GO:0005525
Bisa08g0930 562 PRINTS GTP-binding SAR1 protein signature 400 423 IPR006689 GO:0003924|GO:0005525
Bisa08g0930 562 SMART arf_sub_2 382 562 - -
Bisa08g0930 562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 559 IPR027417 -
Bisa08g0930 562 Pfam Mitochondrial carrier protein 237 320 IPR018108 -
Bisa08g0930 562 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Bisa08g0930 562 Pfam Mitochondrial carrier protein 34 115 IPR018108 -
Bisa08g0930 562 ProSiteProfiles small GTPase Arf family profile. 392 558 - -
Bisa08g0930 562 Gene3D Mitochondrial carrier domain 32 322 IPR023395 -
Bisa08g0930 562 SMART sar_sub_1 382 558 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0930 Bisa-ChrBisa08 16793515 16801720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0930 17 317 Chloroplast and Mitochondria Gene Families AT5G15640 50.165 3.08e-100 304