Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0922 ATGGAGGCGAAGTTTCGGGGAAAGAGTCAGTGTGTCTGTGGACCTGTAGTACCGGAAATGAAGTCTGTTAGGAAGAAGAGTTTGGAATGGAATCTGGAAGACTGGAAATGGGACGGAGATCTCTTCACAGCTAGTCCACTAAATTCAGTTCCATCTGATTGTAGAAATAGGCAGCCTTTCCCAGTTGATCCTGAAATTGCTGCAAAAGCTAATACCTCTAACAGTTTATCTTCTAATTGGGATGATCTCCACCCCGAGACAGGAAAGAGAGAATTGGAAAAAAGGAGAAGAGCTGTTATAGCTGAAGGGGATGAGCTGAATGATGAAGCTGGTTGTCTTAATTTAAATCTGGGGGGTCAAATTTACCCTATCATGGAAGGGGATGAAAAAAGTGGAAAGAAGACAAAAATAGTCGGGAGTGGGACTACTTCAAACCGAGCCGTCTGTCAGGTGCAAGATTGTAGGGCTGATCTTACTAATGCAAAGGATTACCATCGCCGGCATAAGGTTTGCGACATGCATTCCAAGGCCAGTAAGGCCCTGGTGGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGCAAGAGAAGTTGCCGAAGGCGTTTGGCAGGCCACAACAGGAGGAGGAGGAAAACACATCCGGATGCCGTAGTCAGTGGAGGCTCCCTAAATGATGAAAGGGGTAGCAGCTATCTGTTAACAAGTCTTCTCCGTATACTGTCCAATATGCACTCAAATGGCTCAGATCTTACTAGGGACCAAGATATACTCTCTCATCTGCTGAGGAACCTGGCTGGTACACTTAATGGAAGGAACATAGCCCCCTTGTTGGAGGGATCCGAAGGTTTGGTGAATGCTGGGACATCTGGAACTGCCCAGAAGGTGCCCAATCTAAATTCAAATGGTCCTGAGCCCTTCAGGCCTTCTGGTTCTTCCGTTAAGATAGATAATGGTCCCAGCAGTCAAGGCCTTCCAAAGCCTATGGGACGGTGTGAGACAGAGCCTTCTATTGATATGGTGCAAGAATGTTTACCTTCAAGTGACGGTGGAGTAGGAAGTTTAAAATCTCCTTCAGGACCACAGCCTTCAAATCGACTTGTGTTAAGGGATAACCTTCCTCCCCAATCAGTTGCTGCAGAGGCTACAGTTGGAAGGAATGGCTTAAATAACATAGACCTGAATAACGTATATGATGATGCACAGGATGATGCGGAGAACCTTAGGAAGTCTCATCCTCCTGGGGCTTCAGGGATTGGTTCTCTTGATCATCCTTCATGGTTACAGCGTGACTCTCAAAAGTCAAGTCCACCACAGACTAGTAGAAACTCAGATTCAACCTCTACCCAGTCACTTTCTAGTTCTAGTGGAGAGGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGCAAGGATCCAAATGATTTTCCTGTTGTCCTCCGATCACAGATTCTCAACTGGTTATCCCGCAGTCCCACAGAGATTGAGAGCTATATAAGGCCAGGCTGTATCATATTAACAATTTATCTCTGTTTGGAAAAATCTGCATGGGAGGAGCTCTGCTGTAATCTAGGACCCAGCTTGAAAAAGCTTCTTGCTGCAGCAAATGATTCTTTCTGGAGGACAGGATGGGTATACACAAGGGTGGGGAACTCTGTAGCTTTTCTGTACGATGGTCAGGTTATTTTAGATGTTCCCCTGAGCCTCAGAAGCCCACAACATTGTAGAATTTCATGTATTAAACCACTCGCTGTTTCTGCAAATGCAAGCACTCAATTTATTGTGAAAGGTTTCAACCTTTTCCATTCTAGCACCAGGTTACTCTGCGCACTCGAAGGGAAGTATCTAGCACAGGATAGTTGTTGTGACTTGATTGATTGTGCTGATGCAGCTATTGAACATGATGAGCTTCAACGCCTTAGCTTCTCTTGTCATATACCAAGCATAACTGGGAGGGGGTTTATTGAGGTGGAAGATCATGGCCTGAGCAGCTGTTCCTTTCCTTTTATAGTTGCAGAGCCAGAAGTTTGTTCGGAGATCTGTAATTTGGAGAATGTGATTGAGGCAGCCGAGATATGTAAAGATGTTCAGGTAAGAAGCAAACAAATGGAAGAAAAGACTCGAGCCTTGGACTTCATACAAGAAATGGGTTGGCTCCTTCACAGAAGTCGTATGAAGGTTAGGTTAGGTCCCATGGCACCCATCCAGGATCTCTTCCATTTCAGTCGGTTCACATGCCTTGTTGACTTCTGCATGGATCATGATTGGTGTGCTGTGATGAAAAAACTCTTGGACATCATGTTTGAGGGTACTGTTGATGCAGGAGAACACACCTCCATTGAGCTAGCAGTGTTAGACTTGGGTCTTCTACACAGAGCTGTGAGGAGAAATTGCAGGCCTATGGTGGAACTACTGTTGAAATTTGCACCTGTTCAAACTTCAGATGGCACAGACAGTAAGGAGAAGCAGCTTGACAAACAATCAGACAGATTCTTATTTAAACCTGATACTGTTGGGCCTGCTGGGTTGACTCCCCTTCATGTTGCAGCGAGTACGAATGGCTTGGAGAATGTATTAGATGCATTAATCAATGATCCTGGAATGGTGGGAATTGAGGCATGGAAAAATGCCCGGGATAAGATGGGTTTGACGCCACACGACTATGCAACAATGAGGGGCTACCACTCCTACATTCAACTTGTGCAGAGGAAAACAATCAAGAAAGGTGAAACTCATCATGTGCTTGATATCCCCAGTACCCTTGCAGATGGTAACACCAAGAAGAAGCAATCAGATTGGCATAGGCCATCCTCAAAAGTTTCAAGCTTGCAGACCGAGAAGATCGAATTAGCAGCAGCAAGGCCACATCACTGTGAGCTATGCCAGTGCAGGCTGGCTTATACCAGCACGAAAGCAGCGCTGGTTTATCGGCCAGTAATGCTCTCGATGGTGACCATTGCAGCTGTGTGTGTCTGTGTGGCTTTGCTCTTCAAAAGCTCACCCAGAGTTAACTATGTCTTCCGGCCCTTCACATGGGAATCATTGGATTATGGTTCAATGTAG 3099 0.455 MEAKFRGKSQCVCGPVVPEMKSVRKKSLEWNLEDWKWDGDLFTASPLNSVPSDCRNRQPFPVDPEIAAKANTSNSLSSNWDDLHPETGKRELEKRRRAVIAEGDELNDEAGCLNLNLGGQIYPIMEGDEKSGKKTKIVGSGTTSNRAVCQVQDCRADLTNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVSGGSLNDERGSSYLLTSLLRILSNMHSNGSDLTRDQDILSHLLRNLAGTLNGRNIAPLLEGSEGLVNAGTSGTAQKVPNLNSNGPEPFRPSGSSVKIDNGPSSQGLPKPMGRCETEPSIDMVQECLPSSDGGVGSLKSPSGPQPSNRLVLRDNLPPQSVAAEATVGRNGLNNIDLNNVYDDAQDDAENLRKSHPPGASGIGSLDHPSWLQRDSQKSSPPQTSRNSDSTSTQSLSSSSGEAQSRTDRIVFKLFGKDPNDFPVVLRSQILNWLSRSPTEIESYIRPGCIILTIYLCLEKSAWEELCCNLGPSLKKLLAAANDSFWRTGWVYTRVGNSVAFLYDGQVILDVPLSLRSPQHCRISCIKPLAVSANASTQFIVKGFNLFHSSTRLLCALEGKYLAQDSCCDLIDCADAAIEHDELQRLSFSCHIPSITGRGFIEVEDHGLSSCSFPFIVAEPEVCSEICNLENVIEAAEICKDVQVRSKQMEEKTRALDFIQEMGWLLHRSRMKVRLGPMAPIQDLFHFSRFTCLVDFCMDHDWCAVMKKLLDIMFEGTVDAGEHTSIELAVLDLGLLHRAVRRNCRPMVELLLKFAPVQTSDGTDSKEKQLDKQSDRFLFKPDTVGPAGLTPLHVAASTNGLENVLDALINDPGMVGIEAWKNARDKMGLTPHDYATMRGYHSYIQLVQRKTIKKGETHHVLDIPSTLADGNTKKKQSDWHRPSSKVSSLQTEKIELAAARPHHCELCQCRLAYTSTKAALVYRPVMLSMVTIAAVCVCVALLFKSSPRVNYVFRPFTWESLDYGSM 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0922 1032 Coils Coil 89 109 - -
Bisa08g0922 1032 Gene3D - 139 210 IPR036893 GO:0003677|GO:0005634
Bisa08g0922 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 84 856 IPR044817 GO:0003677
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 436 470 - -
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 296 330 - -
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 296 379 - -
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 415 470 - -
Bisa08g0922 1032 FunFam Squamosa promoter-binding-like protein 14 140 210 - -
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 213 234 - -
Bisa08g0922 1032 Gene3D - 750 919 IPR036770 -
Bisa08g0922 1032 MobiDBLite consensus disorder prediction 362 379 - -
Bisa08g0922 1032 SUPERFAMILY SBT domain 147 228 IPR036893 GO:0003677|GO:0005634
Bisa08g0922 1032 ProSiteProfiles Ankyrin repeat profile. 853 876 IPR002110 GO:0005515
Bisa08g0922 1032 ProSiteProfiles Ankyrin repeat region circular profile. 853 876 - -
Bisa08g0922 1032 Coils Coil 401 421 - -
Bisa08g0922 1032 ProSiteProfiles Zinc finger SBP-type profile. 146 223 IPR004333 GO:0003677
Bisa08g0922 1032 Pfam SBP domain 149 222 IPR004333 GO:0003677
Bisa08g0922 1032 SUPERFAMILY Ankyrin repeat 799 914 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0922 Bisa-ChrBisa08 16674746 16683266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0922 173 301 SBP-box Gene Family AT2G47070 58.519 2.58e-38 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa08g0922 SBP 1.7e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0922 08 16674746 16683266 Bisa08g0922 08 16674746 16683266 ECH