Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0911 ATGAGTGCCAAGGTGATTGGAGGAATCGTCGCCCTCATTGTTGTGGTAGGGGCAGTGTGTGGCATCGTAGCTGGTGTGGCTTATTCTGGCTCTGGTAAGAAGAAGGATGTCTCCACAGCCTCAAAGTCCGTTGAGGCTATCTGCAATCCCACCGATTACAAGGAACAATGTATTGAGAGCCTTAGCTCCCTGGCAGAGAATAAAAGTGCCACCCCACAGGACTACATTCAAGCTGCCATTAGCTACACCCTCAAGCAGGTTGAGAAAGCCATGAACAGGTCAAGTGGCATGGGCCAGATGGCCAAGGATGGGAGGGAGAAGATGGCAGTGGAGGATTGCAAGGACTTGCTGCAATTCGCCGTTGATGAGCTCCAAGCTTCTTTCTCCATGGTGGGTGATGCACAGATGCATACCCTACAGGATAAGGAAGCAGAGCTTAAAGATTGGCTCAGTGCTGTGATATCTTACCAGCAGTCTTGCCTTGATGGGATGGAGCAGCCTGACCTGAAATTGGATATGTCCAATGGGCTTCTCAATGCCACCCAGCTAACCAGCAATGCCTTAGCCATTGTTTCTGCAATTTCTGAGATCTTTGGCACCTTCAACCTCCCATTGTTCGACACTTCAGATTCGAATTCGAGTTCTCCGACTTCAAGTCCAAGTCCGAGTCCGACCCCAACCCCACCCACAGCTGCAAGTTCTAGGAGGCTGCTTGACACAGATAAGGGAAAAGGTGAAAGAGAGAAGGCAGAACGGCCTTATTGGTTATCAGCTGCGGATAGGAAGTTATTGCAGGGTCCAACAAGTGCAAAGCCCAATGTAGTAGTGGCAAAAGATGGGAGTGGACAATTCAAGACTATCGGGGAGGGTCTTGCTGCCTATCCTAAGGGTCATAAAGGAAGATTTGTTATATATGTGAAGGCTGGGGTGTATGACGAGTATGTTATAGTCACTAAGACACAACTTGATGTGTTTATGTATGGAGATGGGCCCGAGAAGACTATAGTCACGGGAAGCAAAAGCCACACTGGTGGTACCTCCACCTTTCAAACTGCACCTTTTTCTGCTATTGGGTTCGGATTCATCTGCAGGGACATGGGATTCAGAAACACAGCAGGGGAATACGTGGCTGCCGAACACGGGCGCGCCATTCTTCGTTGGGTTCACAAACCCCAAAGACTTCTTGTGAAGAAGAAGAAGGTGTTCGTTCGGAAATGGAACATTGTACTGCAGATATTCAGCGGTTGTTCTTGA 1254 0.4896 MSAKVIGGIVALIVVVGAVCGIVAGVAYSGSGKKKDVSTASKSVEAICNPTDYKEQCIESLSSLAENKSATPQDYIQAAISYTLKQVEKAMNRSSGMGQMAKDGREKMAVEDCKDLLQFAVDELQASFSMVGDAQMHTLQDKEAELKDWLSAVISYQQSCLDGMEQPDLKLDMSNGLLNATQLTSNALAIVSAISEIFGTFNLPLFDTSDSNSSSPTSSPSPSPTPTPPTAASSRRLLDTDKGKGEREKAERPYWLSAADRKLLQGPTSAKPNVVVAKDGSGQFKTIGEGLAAYPKGHKGRFVIYVKAGVYDEYVIVTKTQLDVFMYGDGPEKTIVTGSKSHTGGTSTFQTAPFSAIGFGFICRDMGFRNTAGEYVAAEHGRAILRWVHKPQRLLVKKKKVFVRKWNIVLQIFSGCS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0911 417 CDD PMEI-like_3 46 195 - -
Bisa08g0911 417 MobiDBLite consensus disorder prediction 209 252 - -
Bisa08g0911 417 SMART PMEI_2 39 190 IPR006501 GO:0004857
Bisa08g0911 417 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 194 IPR035513 -
Bisa08g0911 417 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 195 IPR035513 -
Bisa08g0911 417 NCBIfam pectinesterase inhibitor domain 31 192 IPR006501 GO:0004857
Bisa08g0911 417 Pfam Plant invertase/pectin methylesterase inhibitor 43 190 IPR006501 GO:0004857
Bisa08g0911 417 Gene3D - 267 400 IPR012334 -
Bisa08g0911 417 MobiDBLite consensus disorder prediction 237 252 - -
Bisa08g0911 417 PANTHER PECTINESTERASE 16 374 - -
Bisa08g0911 417 SUPERFAMILY Pectin lyase-like 270 373 IPR011050 -
Bisa08g0911 417 FunFam Pectinesterase 40 195 - -
Bisa08g0911 417 Pfam Pectinesterase 273 374 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0911 Bisa-ChrBisa08 16491728 16494758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0911 10 386 Carbohydrate Esterase AT3G05610 34.367 6.72e-70 231