Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g0907 ATGCGAGAAACACGCGACTTTATACTGAGTGGCCACGTGTATTTTTCTTACGCCATGGCTACAAAGAAAGTTATAGCAATATGTCAGTCAGGAGGTGAGTTTGTGACGAATAAAGATGGATCATTGTCATACAGTGGCGGTGAAGCCTACGCAATAGACATTGATCAACAGACACAGCTGGGTGATTTGAAGTCAGAAGTAGCAGAAATGTTCAACTGTAATGCAGACACAATGATCATCAAGTACTTCCTTCCCGGTAACAAGAAAACTCTCATTACTGTTTCAAAAGACAAGGACTTGCAGCGCATGATCAATTTCCTGGGAGATTCTGCCTCGGTTGATGTGTTCATCATATCAGAGGAAGCACCAGCGCGAAATACTTCTAACATGCCTGGTAGTAGGTCAAGCAGGACAACTGTGTCAGAAGCTGTTGTTCCTGTTGTTGCCCCTGTTGACGTTCCAGTTGATACAGTTCATGCCATAGAACAAATTGAGGTGGATGTAGCTGATGGAGTCCCTCTATCTTCTTTTCCTGCCATGGAAGACAAGCATCATAAAGCTGCACAGCAGTGGGAAAATACCATCACTGGCGTGGATCAAAGGTTTAATAGTTTTAGTGAATTCCGAGAAGCTTTGCATAAATACTCTATTGCCCATGGGTTTGCTTACAGATATAAAAAGAATGACAGCCATCGGGTCACTGTCAAATGTAAATCTCAAGGTTGTCCTTGGAGGATCTATGCATCAAGGCTATCCACCACCCAACTGATTTGCATTAAGAAAATGAACACAAAACATACTTGTGAAGGGGCTGTTGTAAAAGCTGGGTATCGGGCAACTAGGGGTTGGGTGGGAAGTATCATAAAAGAGAAACTGAAAGTCTCCCCTAACTACAAGCCAAAGGATATTGCAAATGACATAAAACGTGAGTATGGGATTCAGTTAAATTATTCTCAAGCGTGGCGTGCAAAAGAGATTGCTAGAGAGCAGCTACAGGGATCTTATAAAGAGGCATATACTCATCTACCATTCTTCTGCGAGAAGATTAAAGAGACTAATCCTGGGAGTTTTGCAACATTTACGACTAAAGAGGACTCCAGCTTCCATCGTTTCTTTGTGGCATTTCACGCCTCGATATCTGGTTTCCGGCAAGGTTGTCGCCCTCTCCTTTTTATTGATAGCACTCCTTTAAACTCAAAGTACCAAGGGGATTTATTATCTGCAACAGCTGCAGATGGGAATGATGGCATCTTCCCTGTAGCCTTTGCTGTTGTAGATGCTGAGACTGAGGACAACTGGCATTGGTTTCTACAGGAGCTGAAATCAGCATTAGTAACATCTGAGCAAATAACATTTGTTGCAGATTTTCAGAATGGCTTGAAGGACTCACTGGCTGAGATCTTTGAAAAATGCTATCACAGTTATTGTTTACGCCACCTGGCTGAGAAATTGAACAAGGACTTGAAGGGACAATTCTCTCATGAGGCAAGACGTTTCATGGTTAATGATTTTTATTCTGCCGCTTATGCGCCCAAACTGGAGGCCTTTGACCGTAGTATTGAAAATATTAAAGGTATTTCTCCTGAAGCCTACAACTGGGTCATACAGAGTGAACCAGAGCACTGGGCCAATGCATTCTTTGCTGGAGCAAGGTATAATCATCTGACATCCAATTTTGGACAGGAATTCTACAGTTGGGTGTCCGAGGCACATGAGTTGCCAATTACTCAAATGATTGATGTATTACGTGGTAAGATGATGGAAGCAATTTATACACAACGGGTGGAATCCAATCAATGGATGACAAAATTGACACCATTAAAGGAAGAAATGCTTCAAACTGAATCCTCAGTTGCACGGTCACTTCAAGTATTGCTCTTACAGGGTAGCACATTTGAGGTCCGTGGAGAATCTGTCGAGATTGTTGATGTTGATCGTTGGGATTGTAGCTGCAAGAGATGGCAAATTACTGGGTTGCCTTGCTGTCACGCTATAGCTGTATTTGAGTGCATTGGTAGGAGCCCCTATGATTACTGTTCCAGATACTTCTCTGTTGAAAATTACCGATTAACATATGCAGAATCTATTTTCCCGGTACCGAATGTGGACAGACCAGTCCAGTATGAATCAACATTAGCTGTAACTGTCACCCCTCCACCAACTAAGCGACCTCCAGGTCGACCAAAGATGAAGCAGGTGGAATCAATAGATGTAATTAAACGGCAACTGCAGTGCAGTAAATGCAAGGGACTCGGCCACAATAAGAAGACATGCAAACTTTTATAG 2286 0.4269 MRETRDFILSGHVYFSYAMATKKVIAICQSGGEFVTNKDGSLSYSGGEAYAIDIDQQTQLGDLKSEVAEMFNCNADTMIIKYFLPGNKKTLITVSKDKDLQRMINFLGDSASVDVFIISEEAPARNTSNMPGSRSSRTTVSEAVVPVVAPVDVPVDTVHAIEQIEVDVADGVPLSSFPAMEDKHHKAAQQWENTITGVDQRFNSFSEFREALHKYSIAHGFAYRYKKNDSHRVTVKCKSQGCPWRIYASRLSTTQLICIKKMNTKHTCEGAVVKAGYRATRGWVGSIIKEKLKVSPNYKPKDIANDIKREYGIQLNYSQAWRAKEIAREQLQGSYKEAYTHLPFFCEKIKETNPGSFATFTTKEDSSFHRFFVAFHASISGFRQGCRPLLFIDSTPLNSKYQGDLLSATAADGNDGIFPVAFAVVDAETEDNWHWFLQELKSALVTSEQITFVADFQNGLKDSLAEIFEKCYHSYCLRHLAEKLNKDLKGQFSHEARRFMVNDFYSAAYAPKLEAFDRSIENIKGISPEAYNWVIQSEPEHWANAFFAGARYNHLTSNFGQEFYSWVSEAHELPITQMIDVLRGKMMEAIYTQRVESNQWMTKLTPLKEEMLQTESSVARSLQVLLLQGSTFEVRGESVEIVDVDRWDCSCKRWQITGLPCCHAIAVFECIGRSPYDYCSRYFSVENYRLTYAESIFPVPNVDRPVQYESTLAVTVTPPPTKRPPGRPKMKQVESIDVIKRQLQCSKCKGLGHNKKTCKLL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g0907 761 CDD PB1_UP2 27 118 - -
Bisa08g0907 761 Pfam SWIM zinc finger 642 671 IPR007527 GO:0008270
Bisa08g0907 761 SMART 26again6 647 674 IPR006564 GO:0008270
Bisa08g0907 761 Pfam PB1 domain 39 107 IPR000270 GO:0005515
Bisa08g0907 761 Pfam MULE transposase domain 390 482 IPR018289 -
Bisa08g0907 761 PANTHER POLYPROTEIN, PUTATIVE-RELATED 185 730 - -
Bisa08g0907 761 ProSiteProfiles Zinc finger SWIM-type profile. 640 672 IPR007527 GO:0008270
Bisa08g0907 761 SMART PB1_new 37 120 IPR000270 GO:0005515
Bisa08g0907 761 Pfam MuDR family transposase 194 259 IPR004332 -
Bisa08g0907 761 SUPERFAMILY CAD & PB1 domains 39 114 - -
Bisa08g0907 761 Gene3D - 43 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g0907 Bisa-ChrBisa08 16406088 16409469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g0907 21 104 MAP Kinase Kinase Kinase AT1G16270 34.884 8.36e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g0907 08 16406088 16409469 Bisa08g0907 08 16406088 16409469 ECH